Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6708 |
Symbol | |
ID | 4453966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 944424 |
End bp | 945455 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698770 |
Product | inner-membrane translocator |
Protein accession | YP_840330 |
Protein GI | 116687083 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.46964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.292611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAA TGACATCCGA TCGAAGCCAG GCCGACGAAC GGGCGGCGCG ACAGCGGCGG CGCGACCTGA TCCAGAAGTT CGCGGCGCTG GGCAGTCTCG TCGTGCTCGT GTTCGCGTTC TCGATATCGA GCGCGGCGTT CTTCTCGGTC GACAACCTGA TGACCGTCGG CCTGCAGGTC ACGTCCATCG CCTATCTGGG CGTGGCCGCC ACCTGCGTGA TCATCACCGG CGGCATCGAC CTGTCGGTCG GCTCGGTGCT CGCGCTGGCC GGCGTGTGCG CCGCGCTGCT GGTCAAGGCC GGCGTGCCGG TGCCCGCGGC GATGGCGGCC GGCATCCTGG TCGGCGCGCT GTGCGGGCTC GTCAACGGCA TCTGCGTGAC GCAGATGGGC CTGCCGCCGT TCATCGCGAC GCTCGGCATG ATGCTCGTCG CGCGCGGCAT CGCGCTCCAG ATCACGGGCG CCCGGCCGGT ATCGGATCTC GGCGACGCGT TCGGCGCGCT CGGCAACGGC GCGCTGCTGC GGATCTCGCG GATCGGCGCA GACGGCTTCC CCGACACGAC CTTTCCCGGC ATTCCGTATC CGGTCGTGAT CATGGTCGTG CTGTTCGTCG TGGTGTCGGT CCTGCTGTCG AGAACGTCGC TCGGCCGTCA TATCTATGCG GTCGGGTCGA ACGCGGAAGC GGCCCGGCTG TCGGGCGTGA ACGTGCAGGG CGTGAAGCTG TTCACCTACG TGCTGTCCGG CGCGCTCGCG GGCGTGACCG GCTGCGTGCT GATGTCGCGG CTCGTCACCG GGCAACCGAA CGAAGGCGTG ATGTACGAGC TCGACGCGAT CGCCAGCTCG GTCATCGGCG GCACGTCGCT GATGGGCGGC GTCGGCACGA TTTCCGGCAC GGCGATCGGC GCGTTCGTGA TCGGCGTGCT GCGCAACGGC CTGAACATGA ACGGCGTGTC GAGCTTCATC CAGCAGATCA TCATCGGCGT CGTGATCCTC GGCACGGTGT GGATCGACCA GTTGCGCAAT CGCCGGCCCT GA
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Protein sequence | MLEMTSDRSQ ADERAARQRR RDLIQKFAAL GSLVVLVFAF SISSAAFFSV DNLMTVGLQV TSIAYLGVAA TCVIITGGID LSVGSVLALA GVCAALLVKA GVPVPAAMAA GILVGALCGL VNGICVTQMG LPPFIATLGM MLVARGIALQ ITGARPVSDL GDAFGALGNG ALLRISRIGA DGFPDTTFPG IPYPVVIMVV LFVVVSVLLS RTSLGRHIYA VGSNAEAARL SGVNVQGVKL FTYVLSGALA GVTGCVLMSR LVTGQPNEGV MYELDAIASS VIGGTSLMGG VGTISGTAIG AFVIGVLRNG LNMNGVSSFI QQIIIGVVIL GTVWIDQLRN RRP
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