Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6678 |
Symbol | |
ID | 4453988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 908053 |
End bp | 909006 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698740 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_840300 |
Protein GI | 116687053 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.367401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAA TTCTCATCGG GCTGATCGGC CGGCGCATCG CGGTCACCGC GCTGACGCTG CTGATCGTGT CCGCGATCAT CTTCACGATC ACGAACCTGC TGCCGGGCGA CGCCGCGCAG GCCGCGCTCG GCCAGTCCGC GACGCCGGAG ACGGTCGCCG CGCTGCGCCA GCAGTTCGGT CTCGACATGC CGGCGCACGT GCGCTACCTG CACTGGCTCG CCGGGCTGCT GCACGGCGAC TTCGGCCGGT CGTTTTCCGG CGACATGCCG GTGTCGGAGC TGATCGGCGG GCGCCTGCCG AAGTCGCTCG CGCTGGCGGC GATCACGACC GCCGTGTCGG TGCCGATCGC GCTGCTGCTC GGCATCCTCG CGGCGGTCAA GCGCGAGTCG GTGGTCGACC GCGTGATCAG CCTCGGCACG CTGTCGCTCG TCGCGACGCC GGAATTCCTG ATCGCGACGG TCGCCGTGCT CGTGTTCGCG GTGAAGCTGC ACTGGCTGTC CGCGCTGTCG TACAGCGGCC CGATCGAAAG CCTGCACGAT TTCCTGCGTG CGTATGCGAT GCCGGTGCTG ACGCTGTGCG CGGTCGTGAT CGCGCAGATG GCGCGGATGA CGCGCGCCGC GGTGATCGAG CAATTGAGCG CGTCGTACGT CGAGATGGCC ACGTTGAAGG GCGCGAGCCC CGCGCGCGTC GTGCTACGCC ATGCGTTGCC CAACGCGATC GGCCCGATCG CCAACGCGAT CGCGCTGAGC CTGTCGTATC TGCTCGGCGG CGTGATCGTC GTCGAGACGA TCTTCAACTA TCCGGGCCTC GCGAGCCTGA TGGTCGATGC CGTCAGCAAT CGCGATTTCC CGTTGGTCCA GGCGTGCACG CTGATCTTCT GCGTCGCTTA CCTGACGCTC GTGCTGTTCG CCGACCTGTG CTCGATCGTG TCGAACCCGC GACTGCGCAC CTGA
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Protein sequence | MNRILIGLIG RRIAVTALTL LIVSAIIFTI TNLLPGDAAQ AALGQSATPE TVAALRQQFG LDMPAHVRYL HWLAGLLHGD FGRSFSGDMP VSELIGGRLP KSLALAAITT AVSVPIALLL GILAAVKRES VVDRVISLGT LSLVATPEFL IATVAVLVFA VKLHWLSALS YSGPIESLHD FLRAYAMPVL TLCAVVIAQM ARMTRAAVIE QLSASYVEMA TLKGASPARV VLRHALPNAI GPIANAIALS LSYLLGGVIV VETIFNYPGL ASLMVDAVSN RDFPLVQACT LIFCVAYLTL VLFADLCSIV SNPRLRT
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