| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6660 |
|---|
| Symbol | |
|---|
| ID | 4454180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 886649 |
|---|
| End bp | 887398 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639698722 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_840282 |
|---|
| Protein GI | 116687035 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTCG ACAACCGGAC CATCATCGTG ACCGGCGCCG CGTCGCCGCG CGGGATCGGC
AAGGCCACGG CCCGCGCGCT GGCCGCGCAC GGCGCACGCG TGGCGATCCT CGACCTGCGC
CGCGACGACG CGGAAGCGGC CGCCGCCGAA CTCGGCGCCG GCCATCTCGG CCTCGCCTGC
GACGTGACCG ATCGCGACGC ATGCGCGGCG GCCGCCCGCG CGACGCTTGA GCACTTCGGC
CGCATCGACG GCCTCGTGAA CAACGCCGGC ATCACGCAGC CGGTGCGCAC GCTGGAGATC
TCGGCGCGCG ACTTCGATGC GATCGTCGAC GTGAACCTGC GCGGCACGCT GTACATGTCG
CAAGCGGTGC TGCCCGCGAT GCAGGCGCAG CGCGGCGGCA GCATCGTCTG CATGTCGTCG
GTCTCCGCGC AACGCGGCGG CGGCATTTTC GGCGGCCCCC ACTACAGCGC CGCCAAGGCC
GGCGTGCTCG GCCTCGCGAA GGCGATGGCG CGCGAATTCG GCGCCGACCG GGTCCGCGTC
AATTCGATCA CGCCGGGCCT GATCCAGACC GACATCACCG GCGACAAGCT GACGCCCGAC
ATGCGCGAGG ACATCATCAA GGGCATTCCG CTCGGCCGGC TCGGCGAGGC TGCCGACGTC
GCGCATGCGT GCCTGTTCCT GCTGAGCGAC CTGTCGAGCT ACCTGACGGG CATCACGCTC
GACGTCAACG GCGGGATGCT GATTCACTGA
|
|---|
| Protein sequence | MLLDNRTIIV TGAASPRGIG KATARALAAH GARVAILDLR RDDAEAAAAE LGAGHLGLAC
DVTDRDACAA AARATLEHFG RIDGLVNNAG ITQPVRTLEI SARDFDAIVD VNLRGTLYMS
QAVLPAMQAQ RGGSIVCMSS VSAQRGGGIF GGPHYSAAKA GVLGLAKAMA REFGADRVRV
NSITPGLIQT DITGDKLTPD MREDIIKGIP LGRLGEAADV AHACLFLLSD LSSYLTGITL
DVNGGMLIH
|
|---|
| |