| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6659 |
|---|
| Symbol | |
|---|
| ID | 4454179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 885249 |
|---|
| End bp | 886574 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639698721 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_840281 |
|---|
| Protein GI | 116687034 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCAA AGTACCCCGC ACCGCCCGTC GAGGGCGAGA TGCTGCAACG GGACGACGCG
CGGACGTTCG AAGCGGCCAC CTACGCGAAG GTCGCGCGAC GGCTGATCCC GTTCCTGATG
TTGTGCTACC TCGGCGCGTA TCTCGACCGC GTCAACGTCG GCTTCGCGAA ACTGCAGATG
CTCAACGACC TGCGTTTCAG CGAGACGGTC TACGGGATGG GCGCCGGCAT CTTCTTCCTC
GGTTATTTCC TGTTCGAGGT GCCGAGCAAC CTGATCCTGC ATCGCGTCGG CGCGCGTCGC
TGGCTCGCGC GCATCATGCT GACCTGGGCG GTGATCTCGG CGAGCTTCGT GTTCGTCAAG
TCGCCCACCG CGTTCTACGT GCTGCGATTT CTGCTCGGCG TCGCCGAAGC CGGCTTCGCG
CCGGGCGTGA TCCTGTACCT CACGTACTGG TTCCCGTCGG CGCGGCGCGC GAAGGCGCTG
TCGCTGTTCT TCATGGCGAT TCCGCTCGCC GGGATCATCG GCGGGCCGCT GTCGGGCGCG
ATCATGCATT CGCTGCACGG CGCGATGTCG ATGGCCGGCT GGAAGTGGCT GTTCCTGCTC
GAGGCGCTGC CGTCGTTCGT GCTGGGTTTC GCGATCCTGC TGTATCTCGA CGACGGCATC
GCCGGCGCGA AATGGCTGAC CGACGCCGAA AAAGCCTTGC TCGCGCGCAA CGTGTCGGCC
GACGCCGCGC ACACCACCGC CCACCTGTCG ATTCGGACCT TCGTCGCGGA CCGCCGGCTG
TGGCTGATGG CCGCGATCTA CTTCTGCGTG GTGCTCGGGC AGTACGGCCT CACGTTCTGG
CTGCCGACGA TCATTCGCAA GGCGGGCGTG GCCGATCCGC TGTGGGTCGG TCTGTTCACC
GCGATCCCGT ATGCGTGCGC GATCGTTGCG CTGCCGCTGA TCGGCATCAG CGCGGATCGT
CGCCGCGAGC GACGCTTCCA TCTCGCGGTG CCGATGCTGG TCGCGGCGGC GGGCTTCGCC
ACGTTGCCGA TGCTCGGCAG CGTCGGCGCA TCGATCGTGT GCCTGAGCAT CGCGTCCGCC
GGCATCCTCG CGTCGTCGTC GCAGTTCTGG TCGCTGCCGA CCGCGTTGCT GGGCGGGATG
TCGGCGGCGG CGGGCATCGC CGCGGTCAAC TGCTTCGCGA ACCTGGCGGG CTTCTTCTCG
CCGGCGATCG TCGGCTGGCT GAACGACCTG ACCGGCAAGT CCACCGCGGG GCTCGTGTTC
ATCTCCGTCG CGATCACGGC CGGCGCGCTG CTGGTGTTCC TCGTGCCCCG ATCCGTGAAC
CGCTGA
|
|---|
| Protein sequence | MRAKYPAPPV EGEMLQRDDA RTFEAATYAK VARRLIPFLM LCYLGAYLDR VNVGFAKLQM
LNDLRFSETV YGMGAGIFFL GYFLFEVPSN LILHRVGARR WLARIMLTWA VISASFVFVK
SPTAFYVLRF LLGVAEAGFA PGVILYLTYW FPSARRAKAL SLFFMAIPLA GIIGGPLSGA
IMHSLHGAMS MAGWKWLFLL EALPSFVLGF AILLYLDDGI AGAKWLTDAE KALLARNVSA
DAAHTTAHLS IRTFVADRRL WLMAAIYFCV VLGQYGLTFW LPTIIRKAGV ADPLWVGLFT
AIPYACAIVA LPLIGISADR RRERRFHLAV PMLVAAAGFA TLPMLGSVGA SIVCLSIASA
GILASSSQFW SLPTALLGGM SAAAGIAAVN CFANLAGFFS PAIVGWLNDL TGKSTAGLVF
ISVAITAGAL LVFLVPRSVN R
|
|---|
| |