Gene Bcen2424_6652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6652 
Symbol 
ID4454172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp880107 
End bp881123 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID639698714 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_840274 
Protein GI116687027 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATC GACCGAAACA TGTTCTCGTG ACGGGCGGTG CCGGTTTCAT CGGCGCCAAT 
TTTGTGCGTC ATCTGCTCGA AAGCGACCCG CAGGTCAGCG TCACCACGCT GGATCTGCTG
ACCTATGCGG GCAGCCTCGA CAATCTCGGC GACGACCTGC CGGGTGCCGA TCGGCATCGC
TTCGTCCTCG GCGACATCTG CGACCGACCG CTCGTCGAGT CGCTGCTGCG CGACCATGCG
ATCGACACCG TCGTCCACTT CGCGGCCGAA AGCCACGTCG ACCGCTCGAT CGACGGTCCC
GGCGAGTTCG TCCGCACGAA CGTGCTCGGC ACGTGGACGC TGCTCGATGC GTGCCGCCAG
ATCTGGCTGA ACGATCAGAA ACTCGGCCGG GCCGACGCCC ACGCGCGACG GCGCTTTCAC
CATATCGGCA CCGACGAGGT GTACGGTTCG CTGGGCCCCG ACGACCCGCC GTTTTGCGAA
ACGACGCCGT ATGCGCCGAA TTCTCCGTAC TCGGCCACCA AGGCAAGCTC GGATCACCTC
GTGCGAGCGT ATTTCCATAC GTACGGCCTG CCCGTCACCA CGACGAACTG CTCGAACAAT
TACGGGCCGC GCCAGCACGG CGAAAAGTTC ATTCCGACCG TGATCCGTCA TTGCGTCGAA
GGCACCGACA TCCCCGTGTA CGGCGACGGA GCGAACGTGC GCGACTGGCT GTACGTCGAC
GACCATTGCC GCGCGATCGA CGCGGTCATC CGGCGCGGGA CGATCGGCGA GACCTACACC
GTCGGCGGCT GCAACGAATG GCGCAATGTC GACATCGTCG CGCTGATCTG TACGCTGCTC
GACGCGCGAC GGCCCGAACA CGCGCCGCAT GCGCGGCTCG TCCGGTTCGT CACCGATCGC
GCCGGTCACG ACCGGCGGTA TGCGATCGAT GCGGGGAAGC TCGCTCGCGA ACTGCAATGG
CGGCCGGCGG AGAGCTTCGA AACGGGGATC GTGAAGACGC TGGATTGGTA TCTATAG
 
Protein sequence
MSYRPKHVLV TGGAGFIGAN FVRHLLESDP QVSVTTLDLL TYAGSLDNLG DDLPGADRHR 
FVLGDICDRP LVESLLRDHA IDTVVHFAAE SHVDRSIDGP GEFVRTNVLG TWTLLDACRQ
IWLNDQKLGR ADAHARRRFH HIGTDEVYGS LGPDDPPFCE TTPYAPNSPY SATKASSDHL
VRAYFHTYGL PVTTTNCSNN YGPRQHGEKF IPTVIRHCVE GTDIPVYGDG ANVRDWLYVD
DHCRAIDAVI RRGTIGETYT VGGCNEWRNV DIVALICTLL DARRPEHAPH ARLVRFVTDR
AGHDRRYAID AGKLARELQW RPAESFETGI VKTLDWYL