Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6647 |
Symbol | |
ID | 4454167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 875541 |
End bp | 876260 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639698709 |
Product | ABC transporter related |
Protein accession | YP_840269 |
Protein GI | 116687022 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.146774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGACG TGCGCGAACT CGTCGCCGGC TACACACCCG AAGTCGACAT CCTGCACGGT GTGTCGCTCA CGGTTGGCGC GATCGACATC GTGACGATCC TCGGCCCGAA CGGCTGCGGA AAATCGACGC TGCTGAAGGC GATCGCGGGC TTCGTGCTGC CGCGCGCCGG CAGCGTGACG ATCCAGGGCA CGGACGTGGC GCGCGTGCCG GTCCATCGCA AGATCCGCGA GTACGGGATC GGCTTCGTGC CGCAGACCGA CAACGTGTTC GCGTCGCTGA CCGTGCGGGA GAACCTGATG CTCGGCGGCC AGTCGATGTC GGCGTTCCCG CGCGAGGCCC GCATCGACGA GCTGTGCGAG CAGTACCCGG TGCTGCGGCG TCGCCACCGG TCGCTGGCTG GCGCGTTGTC TGGCGGCGAG CGGCAAATCG TGTCGCTCGC CCGCGCGCTG ATGCCGCGGC CCGTGTTGCT GCTGCTCGAC GAGCCGTCGG CGGGCCTGTC GCCGAAGATG GTCGACGAGG TGTTCGACGC GATCGTCCGG ATGCGCGACA CCGAGCATAT CGCCGTGCTG ATGGTCGAGC AGAATGCGAT CGAGGCGCTG CGCATCGCGG ATCGCGGCAT CGTGCTGACG ATGGGGCGCG TCGCGCTCGA AGGCTCCGCT GCCGAGTTGC TCGACAGCGA CGAGATGCGG CGCCTGTACC TCGGCGGGAG GGCCGCATGA
|
Protein sequence | MIDVRELVAG YTPEVDILHG VSLTVGAIDI VTILGPNGCG KSTLLKAIAG FVLPRAGSVT IQGTDVARVP VHRKIREYGI GFVPQTDNVF ASLTVRENLM LGGQSMSAFP REARIDELCE QYPVLRRRHR SLAGALSGGE RQIVSLARAL MPRPVLLLLD EPSAGLSPKM VDEVFDAIVR MRDTEHIAVL MVEQNAIEAL RIADRGIVLT MGRVALEGSA AELLDSDEMR RLYLGGRAA
|
| |