Gene Bcen2424_6647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6647 
Symbol 
ID4454167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp875541 
End bp876260 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content69% 
IMG OID639698709 
ProductABC transporter related 
Protein accessionYP_840269 
Protein GI116687022 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.146774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG TGCGCGAACT CGTCGCCGGC TACACACCCG AAGTCGACAT CCTGCACGGT 
GTGTCGCTCA CGGTTGGCGC GATCGACATC GTGACGATCC TCGGCCCGAA CGGCTGCGGA
AAATCGACGC TGCTGAAGGC GATCGCGGGC TTCGTGCTGC CGCGCGCCGG CAGCGTGACG
ATCCAGGGCA CGGACGTGGC GCGCGTGCCG GTCCATCGCA AGATCCGCGA GTACGGGATC
GGCTTCGTGC CGCAGACCGA CAACGTGTTC GCGTCGCTGA CCGTGCGGGA GAACCTGATG
CTCGGCGGCC AGTCGATGTC GGCGTTCCCG CGCGAGGCCC GCATCGACGA GCTGTGCGAG
CAGTACCCGG TGCTGCGGCG TCGCCACCGG TCGCTGGCTG GCGCGTTGTC TGGCGGCGAG
CGGCAAATCG TGTCGCTCGC CCGCGCGCTG ATGCCGCGGC CCGTGTTGCT GCTGCTCGAC
GAGCCGTCGG CGGGCCTGTC GCCGAAGATG GTCGACGAGG TGTTCGACGC GATCGTCCGG
ATGCGCGACA CCGAGCATAT CGCCGTGCTG ATGGTCGAGC AGAATGCGAT CGAGGCGCTG
CGCATCGCGG ATCGCGGCAT CGTGCTGACG ATGGGGCGCG TCGCGCTCGA AGGCTCCGCT
GCCGAGTTGC TCGACAGCGA CGAGATGCGG CGCCTGTACC TCGGCGGGAG GGCCGCATGA
 
Protein sequence
MIDVRELVAG YTPEVDILHG VSLTVGAIDI VTILGPNGCG KSTLLKAIAG FVLPRAGSVT 
IQGTDVARVP VHRKIREYGI GFVPQTDNVF ASLTVRENLM LGGQSMSAFP REARIDELCE
QYPVLRRRHR SLAGALSGGE RQIVSLARAL MPRPVLLLLD EPSAGLSPKM VDEVFDAIVR
MRDTEHIAVL MVEQNAIEAL RIADRGIVLT MGRVALEGSA AELLDSDEMR RLYLGGRAA