| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6646 |
|---|
| Symbol | |
|---|
| ID | 4454556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 874759 |
|---|
| End bp | 875544 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639698708 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_840268 |
|---|
| Protein GI | 116687021 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0373686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC TGCTCGATCT AGACGGCGTG ACGATCCGCT ACGGCGAGAA CGTCGTCTTG
TCCGGGATCA CGCTGTCGGT CGACGGCGGC GAGATCGTCG GACTGCTCGG CCCGAACGGC
TCCGGCAAGA GCACCGCGCT CAACGCGATC ACCGGCTTCG CGCCGCTCGC GGCGGGCGCG
ATCCGCTTCG ACGGCCAGCG TATCGACGCG CTGTCGCCGC ACAAGATCGC CCGGCTGGGG
GTGCGCCGCA CGTTCCAGTT GCCGTCGATG CCCGCGCGCA TGTCGGTGCT CGAACTCGCG
ATGGCGGCTT CGTCCGCGCA CCACGGCATC GCCGCCGCCC TCTGGCGCGG CCGGGCGACG
CGCGCGCTCG ATGCCGATAC CCGTACGCGC GCCGCCGCGC TGCTGGACGA GCTGAAACTG
TCGGGCGTCG CGCACCTTTC CGCCGCGTCG ATCTCCGGCG GCCAGAAGAA GCTGCTGGGC
ATCGCGTGCG CGATGATGAC CGAGCCCAAG CTGCTGCTGC TCGACGAGCC GACCGCCGGC
GTGCACCCGA ACCTGCGCGG CGAATTGATC GACGCGCTGC AACGGATTCG CGAACAGGGC
GTCACGCTGG TCGTCATCGA GCACGACATG CATTTCATCC GCGAGCTGTG CGACCGCTGT
GTCGTGCTGG ACCGCGGCGT GACGATCGCG AACTGCCGCC CGGCCGAGCT GGAGCGCAAC
CGTCGCGTAC TCGATGCGTA TCTCGGGCGC GCCCATGCCG CCCCTCGCCC GCTGGAGGCG
TCATGA
|
|---|
| Protein sequence | MSALLDLDGV TIRYGENVVL SGITLSVDGG EIVGLLGPNG SGKSTALNAI TGFAPLAAGA
IRFDGQRIDA LSPHKIARLG VRRTFQLPSM PARMSVLELA MAASSAHHGI AAALWRGRAT
RALDADTRTR AAALLDELKL SGVAHLSAAS ISGGQKKLLG IACAMMTEPK LLLLDEPTAG
VHPNLRGELI DALQRIREQG VTLVVIEHDM HFIRELCDRC VVLDRGVTIA NCRPAELERN
RRVLDAYLGR AHAAPRPLEA S
|
|---|
| |