Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6643 |
Symbol | |
ID | 4454553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 871852 |
End bp | 872952 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698705 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_840265 |
Protein GI | 116687018 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAA GTCAGTGGAG TGTCGGTATC TGGATCGCGC TCGGTGCGGT TGCGTCGGGC GCTGCACAGG CCGACGTGAG CGTGGGCGCG GTGCTGCCGC TGACCGGCGC GAGTGCGTCG ATCGGCGAAG ACCAGCGCCG CGGCATCGAG CTCGCCGTCG CGCAGATCAA TGCGAAAGGC GGCGTGCTGG GCCAGAAGCT CGCCGTGCGC ATCGAGGATT CGGGCGGCTC GGCCAATACC GCGCTCGACG CCGCACGCAA GCTCGCGACC GTCGAGCACG TGCCGGTCGT GCTCGGCGAG TTCTCGTCGT CGGTGACGAT TCCGGTCGGG CAGTTCCTGG TGCGTCAGGG CGACGTGCAC ATCAACATCG GCTCGTCGAG TCAGCAAGTG CGCAAGATCG GCGCGGGCTC GTTCAGCGTG ATCGGGCTGG ACGACCTGTC CGCGCGCTTC GCCGCGCAGG ACGTGTATGC CCGCAAGCTG CGCCGCATCG CACTGATCGC GCCGAACAAC GGCTATGGCC AGGGCATCGC GGGCGAATTC AGGAAGCGTT TCGAGGCGCT CGGCGGCACG GTGGTGTCGA CGGTGCTCTA CACGGAAGGG CAGTCGACCT ATCGCCGCGA GCTGGAGCAG GCGTCGCGCG CGCAGCCCGA CGCGTACGTC TACAGCGCCT ATGGCCAGGA AGCCGCGACG CTGAACCGCC AGGCGTTCGA GATGCGGCTC AACCAGCATC CGTGGTACGG CATCTATCTG ACGATGTGCA CGAGCGACAC GCCCGCGCAG ATCGCGCAAG GCCAGATCGG CCTCGAGGTC GCCGCGCTCG GCGCGGGCGC GAAAGCGTAT GCGAGCGCCT ATCAGGCCGC GTACAACGAG GCCCCGCGCT CGGCGTTCGG CAGCTATGCG TACGACGCGA CGCTGTTGTC CGCCGCCGCG ATCGGCCGCG CGCAATCCAT CGAACCGGCG AAGATTCGCA CGGCGCTCGC GGCATTGGGC AAGTCGTATA CCGGCGTGAC CGGCGCGATC GCGTTCGATG CCGACGGCCA GCGCGAAGTC CAGCCCTACG AGAAGGTGAT CTACCGCCAA TCGGTCGTCG CGCAGCAGTG A
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Protein sequence | MKASQWSVGI WIALGAVASG AAQADVSVGA VLPLTGASAS IGEDQRRGIE LAVAQINAKG GVLGQKLAVR IEDSGGSANT ALDAARKLAT VEHVPVVLGE FSSSVTIPVG QFLVRQGDVH INIGSSSQQV RKIGAGSFSV IGLDDLSARF AAQDVYARKL RRIALIAPNN GYGQGIAGEF RKRFEALGGT VVSTVLYTEG QSTYRRELEQ ASRAQPDAYV YSAYGQEAAT LNRQAFEMRL NQHPWYGIYL TMCTSDTPAQ IAQGQIGLEV AALGAGAKAY ASAYQAAYNE APRSAFGSYA YDATLLSAAA IGRAQSIEPA KIRTALAALG KSYTGVTGAI AFDADGQREV QPYEKVIYRQ SVVAQQ
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