Gene Bcen2424_6640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6640 
Symbol 
ID4454550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp869109 
End bp869924 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID639698702 
ProductAsp/Glu racemase 
Protein accessionYP_840262 
Protein GI116687015 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TTCTCTCTAC CCCCCAGACG TCCGATCCGG GTGTCGGCGC CGGCCCGGCG 
CGCGATGCGT ACGCCCGCTT CGATTTCTCG CTCGACGCCG GCATCGCGCG GCGCGCGGCG
ATCGGCCTCG TCGTGCTGGC GACCGATCAT ACGATCGAAT ACGAGTGGCG ACGTCTGCTC
GCCATCGATG GCGTCGCGTT CTACGAAAGC CGGATCGCGA ATTCGGCCGA GATCACGGCC
GAAACGCTCG CGCGGATGGA CGGCGGCATC TGCGCGGCGG TCGAGTTGAT CCGGCCGGGC
GAGCGCCTCG ACGTCGTGGC GTTCGGCTGC ACGTCGGCGT CGATGGTGCT CGGCGAGGAA
CGCGTCTTCG AGCGCATTCG CGAGGCGCGG CCCGGCGTCG CGTGCACCAC GCCGATTACC
GCGGCACGCG TCGCGCTGAC GGCGCTCGGC GCGCGCGGCG TCGCACTGCT GACGCCATAC
GAGCGCGCGA TCAACGATGC GATGGCCGCG TACCTGCGTG CACGCGGCGT CGATATCGTG
CGGGTGGGCT CGTTCGAGCA CCGCGACGAC AACGAGGTCG CCCGGATCGA GCGCTCGTCG
ATCGAGCACG CGGTGCTGAC GCTCGCCGCC GATCCGGCCG TCGATGCGGT ATTCGTGTCG
TGCACGAGCC TGCGCATCGT CGATGCGCTG GCCGACATCG AGGCGCGGGC GGGCAAACCC
GTGCTGTCGA GCAATCACGC GCTCGCATGG CACGCGCTGC GGCTCGCGGG CATCGACGAT
CCCGTGCCGG GCTTCGGCAG CCTGCTGATG CGCTGA
 
Protein sequence
MSELLSTPQT SDPGVGAGPA RDAYARFDFS LDAGIARRAA IGLVVLATDH TIEYEWRRLL 
AIDGVAFYES RIANSAEITA ETLARMDGGI CAAVELIRPG ERLDVVAFGC TSASMVLGEE
RVFERIREAR PGVACTTPIT AARVALTALG ARGVALLTPY ERAINDAMAA YLRARGVDIV
RVGSFEHRDD NEVARIERSS IEHAVLTLAA DPAVDAVFVS CTSLRIVDAL ADIEARAGKP
VLSSNHALAW HALRLAGIDD PVPGFGSLLM R