Gene Bcen2424_6637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6637 
Symbol 
ID4454547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp866264 
End bp867199 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content68% 
IMG OID639698699 
Productdihydrodipicolinate synthetase 
Protein accessionYP_840259 
Protein GI116687012 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.207106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGC CTACGCCGAT TCACCGCCGC TATACAGGCG CGTTCTCCGT CGCGCCGACG 
ATCTTCACCG AGTCGGGCGA GATCGACATG CCGGGCCAGA AGCGCTGTGT CGACTTCATC
ATCGACGCGG GAGCGGATGG CCTGTGCATC CTGGCGAACT ACTCGGAGCA GTTTTCGTTG
ACCGACGACG AGCGCGAGCG GCTCATCGCG GCGATCCTCG AGCACGTAGC GGGGCGCGTG
CCGGTGATCG TGACGACCAC GCATTTCAGT CCGGCGATCT GCGCGGCGCG CAGCCGCGCC
GCGCAGGCGG CCGGTGCGTC GATGGTGATG GTGATGCCGC CGTACCACGG CGCGACGATT
CGTTGCGGCG AGGCTGCGAT CGAGCAGTTC TATGCGGAGC TTTCCGACGC GATCGCGATT
CCGATCATGT ACCAGGATGC GCCGATGAGC GGCACGCAAG TATCGGCCGC GTTTCTGGCG
CGCATCGCGC ACACGATTCC GAATCTGCGC TATTTCAAGA TCGAGGTGCC GCAATCGGCA
GCGAAGCTGC GCGAGCTGAT CGCGCTCGGC GGCGACGCGA TCGAGGGGCC GTTCGACGGC
GAGGAAGCGA TCACGCTGCT CGCCGATCTC GATGCGGGCG CGACCGGCAG CATCCTCGGC
GGCGGTTATC CGGACGGGCT GCGGCCGATT CTCGCCGCGT ATCTCGCCGG GCGGCGCGAC
GAGGCGGTCG CCCAGTACGA GCAATGGCTG CCGTTGATCA ATTACGAAAA TCGTCAGGCC
GGCCTGCTGG CGGCGAAGGC GCTGATGAAG GAGGGCGGCG TGATCGCATC GGACGCGCCG
CGCCGTCCGC TCGCGCCGCT GCATCCGGCC ACGCGCGCGG GCCTGATCGA GATCGCGCGA
CGGCTCGACG CGCGGGTGCT GCGCTGGGCA CGCTGA
 
Protein sequence
MSLPTPIHRR YTGAFSVAPT IFTESGEIDM PGQKRCVDFI IDAGADGLCI LANYSEQFSL 
TDDERERLIA AILEHVAGRV PVIVTTTHFS PAICAARSRA AQAAGASMVM VMPPYHGATI
RCGEAAIEQF YAELSDAIAI PIMYQDAPMS GTQVSAAFLA RIAHTIPNLR YFKIEVPQSA
AKLRELIALG GDAIEGPFDG EEAITLLADL DAGATGSILG GGYPDGLRPI LAAYLAGRRD
EAVAQYEQWL PLINYENRQA GLLAAKALMK EGGVIASDAP RRPLAPLHPA TRAGLIEIAR
RLDARVLRWA R