Gene Bcen2424_6622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6622 
Symbol 
ID4454774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp850168 
End bp851361 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content65% 
IMG OID639698684 
Productporin 
Protein accessionYP_840244 
Protein GI116686997 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.446699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAG CAGTCTGCAC TGCTGCGGTG GCTTGCGCCC TCGCGGCGCC GCTCACGGTC 
CATGCGCAAA GCTCGGTCAC GTTGTACGGC ATCATCGATA CGGGCATTGC CTGGACGAAT
ACGGTCGCGT CGTCGATCAA GGCGCAGGGC GCGTCGCGCT GGTCAATGGC GACCGGCTGG
GGCAGCGGTG ACCGCCTGGG TTTCCTCGGA CGCGAGGATC TCGGCGGCGG CCTCTCCGCG
GTGTTCCAGC TCGAAGCGGG GTTCAGCGGA TTGAACGGCA CGTCGTCGCA GGGCGGCCGA
CTGTTCGGAC GGCAGGCGTA CGTCGGCTTG TCGAGCAAGC AGTACGGCAA GCTGACGCTC
GGCCGTCAGT ATGACTACAC GTTCGACTAC GTTGCACCGC TGATGGCATG GCTTCAGTTC
GGCAGCATCT ACGGCGCGCA CATCGGGGAC GTGGACGACA GCTTCCAGAC GTTTCGCCTG
AACAACAGCG TCAAGTACGA GGTAAGTCCG CTCGCGGGAC TGAAGCTCGG CGCGCTCTAT
GCATTCAGCA ACCAGGCGGG CGGCGGCGCC GGCCAAGGCT TCGCCAACAA CCGCGCGTAC
GGCTTCGGGC TCGATTACCT GCGCGGACCG TTGCATGTGG TCGCGAGCTA TCTGCAACTG
AACAATCCGT CGGCGGGGAT TGCGTCGTCG GGGAATAATC CGAACGGCGC GATCGGCGAC
GAGTACAGCG GTTCGACCAG CCTCTTCTAC AACGCGGGCT TCGTCGAGCG TCAGCGCATC
TCGGCACTGG GCGCCGGCTA TTCGTTCGGC GCGGCAGCGG TGAACCTGGT CGTCACCGAC
ACGCGGCTCG CTTATCGCGG CGGCCACAGC CTGCGCGTCG ACAACTACGA GATCAACGGG
CGCTACAACT TCACACCGGT GCTGATCGCG GGGGTCGGCT ACATCTTCAC CGATGGCCAT
GGGTATACCG GCAGCGGCGC CACGTCGTTC GCGACCGGCG ACCGGCCGAG ATGGCATCAG
GTGGATGCGG GCATCACCTA CCTGCTGTCG AAGCGCACCG ATCTGCACAT GTCGATGGTC
TATCAGCGGC GGGCCGGCGA TGCGGGCACC GTTGCGATCA ACTTCTTCGG ACCGGCGGGG
GCGGGGCGTA GCAGCCAGAT CGCGGTGCTG GCGGGGCTGC GGCATCGCTT CTAG
 
Protein sequence
MKTAVCTAAV ACALAAPLTV HAQSSVTLYG IIDTGIAWTN TVASSIKAQG ASRWSMATGW 
GSGDRLGFLG REDLGGGLSA VFQLEAGFSG LNGTSSQGGR LFGRQAYVGL SSKQYGKLTL
GRQYDYTFDY VAPLMAWLQF GSIYGAHIGD VDDSFQTFRL NNSVKYEVSP LAGLKLGALY
AFSNQAGGGA GQGFANNRAY GFGLDYLRGP LHVVASYLQL NNPSAGIASS GNNPNGAIGD
EYSGSTSLFY NAGFVERQRI SALGAGYSFG AAAVNLVVTD TRLAYRGGHS LRVDNYEING
RYNFTPVLIA GVGYIFTDGH GYTGSGATSF ATGDRPRWHQ VDAGITYLLS KRTDLHMSMV
YQRRAGDAGT VAINFFGPAG AGRSSQIAVL AGLRHRF