Gene Bcen2424_6620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6620 
Symbol 
ID4454772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp847563 
End bp849608 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content63% 
IMG OID639698682 
Producttransketolase 
Protein accessionYP_840242 
Protein GI116686995 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0021] Transketolase 
TIGRFAM ID[TIGR00232] transketolase, bacterial and yeast 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.52083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC CCACCGCACA TTCCCGCACG ACCGCCAAAG CGGTGCCGCC CCCGCGAGAC 
CCGCATCTGC GCGCGCTGGC GAACTGTATT CGCTTCCTTG CAATGGATGC AGTACAGAAT
GCCAACAGCG GCCATCCTGG TGCGCCAATG GGGCTGGCCG ACGTTGCGAC GGTGCTGTTC
AAGGAGTTCA TGCAATTTGA TGCATCCGCC CCCCACTGGA TCGATCGGGA CCGGTTGGTC
CTTTCCAACG GACACGCATC GATGCTCCTC TACAGCTTGC TCTATCTCAC GGGCTATGCC
GACATGACCC TCGACGAGCT CAAGCGCTTC CGGCAAGTCG GCAGCAAGAC GCCAGGTCAT
CCCGAGTACT CGCACGCCGA TGGAATCGAA CTGACGACCG GTCCCCTCGG ACAAGGCATC
GCGGAATCCG TCGGCATGGC GTTGGCCGAG CGCGTCATGA ATGCGCACTT CGGCGATGAC
CTCGTCGATC ACTACACATA CGTATTTCTC GGCGACGGTT GCCTGATGGA AGGCATCAGC
CACGAGGCCA TTTCGTTGGC CGGCCACCTC CGGTTGGGCA AACTGATCGC GTTCTGGGAC
AACAATTCGA TTTCCATCGA CGGTCCCACC CAGCTCGCGG TCTCGGACAA CGAGATCGAG
CGCTTTCACT CGGCTGGGTG GCACGTCCTG GAAATCGACG GTCACGATAC GGACGCGATA
CGGCGCGCGA TCGAGACCGC CAGGACAACG CATGACAGAC CGACGTTGAT CGCATGCAGG
ACGATCATCG GGTTCGGCTT TCCGACGAAG GCTGGCACCG AGAAAGCCCA TAGCGATGCG
CCGGGCGAGG ATGAAATCGC GGGCGCACGC CAGACCCTCG ATTGGCATTC GCCGCCGTTC
GAAATCCCGG ATGACCTGCT GAAAGCATGG CGGGAGATCG GGGCGCGCGG CCGCAAGGCA
AGACTCGCGT GGGATGAGCG TGTCAGCCGG GCGCCGCACG CGCTGCGTAC CGAATTCGAC
CGACGTAATG CCGGAAAGCT TCCGGATGAC TGGAAGACGG CGATTGCGGC GGCACGGCAG
GCGTTTGTTG CCGCAGGCAG TGCAATGGCC ACCCGCAAGG CCAGCGGTGA AGTGCTTGAT
CAACTCTCCG ATGCGATTCC GGAATTGCTG GGCGGCTCGG CGGATCTTAC GCAGTCCAAT
AATACGAAGA CGAAGAACCA GATCGCGATC GAGCCCGGGC AGTTCAAGGG TTCATATGTC
CACTACGGCG TCCGCGAACA CGGCATGGCC GCCGCCATGA ACGGCATTGC CCTTCACGGC
GGCCTCATTC CGTACGGTGG CACCTTTCTT TGTTTTTCGG ACTACTGCCG TCCGGCGATC
CGCTTGAGCG CGATGATGCG GGTGCGCGCC ATCTTCGTGA TGACGCACGA TTCCATCGGT
CTCGGAGAAG ATGGCCCGAC GCATCAACCC GTCGAGCACC TTGCCGCCCT TCGGGCCATT
CCCCAACTCG CCGTCTATCG GCCGGCCGAT CCAGTCGAAA CGGCAGAGTG CTGGGAGCTG
ATTCTCGAAC AGCCCCGCAG GGCTGCGCTG CTCGCATTGT CACGACAGCC GGTCCCGCTC
CTGCGCAACG AGCCCGGAAA CGAAAACAAG TCGGCGCGCG GCGCCTATGT CTTGCGGGAG
GCCGATGGCG GGCCGCGCCG ACTCACCCTG CTCGCGACAG GCTCGGAGGT CGACCTCGCC
GTCCAGGCAC GCGACATCCT GCAGCAGGAA GGCGTGCCGA CGGCCGTCGT ATCGATGCCG
TGCCGCCTGC TCTTCGAGGA GCAACCACGC GATTACCAGC GGGCCGTGCT GGGCACTTCT
CCCGCGAGAG TCGCGGTCGA GGCGGCGGTC GAACTGGGAT GGGAGCGGTA CCTCGGACCG
GAAGGCCGGT TCGTCGGCAT GCACAGCTTC GGCGAGTCGG GAAAAATCAA GGACGTGTAC
AAAAAATTCG ACATCACGGT CGATGCGGTC GTTCGAGCGG CGCGTCAGGT GCTGTCCGAA
GTGTGA
 
Protein sequence
MSDPTAHSRT TAKAVPPPRD PHLRALANCI RFLAMDAVQN ANSGHPGAPM GLADVATVLF 
KEFMQFDASA PHWIDRDRLV LSNGHASMLL YSLLYLTGYA DMTLDELKRF RQVGSKTPGH
PEYSHADGIE LTTGPLGQGI AESVGMALAE RVMNAHFGDD LVDHYTYVFL GDGCLMEGIS
HEAISLAGHL RLGKLIAFWD NNSISIDGPT QLAVSDNEIE RFHSAGWHVL EIDGHDTDAI
RRAIETARTT HDRPTLIACR TIIGFGFPTK AGTEKAHSDA PGEDEIAGAR QTLDWHSPPF
EIPDDLLKAW REIGARGRKA RLAWDERVSR APHALRTEFD RRNAGKLPDD WKTAIAAARQ
AFVAAGSAMA TRKASGEVLD QLSDAIPELL GGSADLTQSN NTKTKNQIAI EPGQFKGSYV
HYGVREHGMA AAMNGIALHG GLIPYGGTFL CFSDYCRPAI RLSAMMRVRA IFVMTHDSIG
LGEDGPTHQP VEHLAALRAI PQLAVYRPAD PVETAECWEL ILEQPRRAAL LALSRQPVPL
LRNEPGNENK SARGAYVLRE ADGGPRRLTL LATGSEVDLA VQARDILQQE GVPTAVVSMP
CRLLFEEQPR DYQRAVLGTS PARVAVEAAV ELGWERYLGP EGRFVGMHSF GESGKIKDVY
KKFDITVDAV VRAARQVLSE V