| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6612 |
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| Symbol | |
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| ID | 4454124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 840118 |
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| End bp | 840786 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639698674 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_840234 |
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| Protein GI | 116686987 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0311568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTTC AGTTCGCCCC GATCCTCGAA CAGTGGCCGT ATCTGCTTGC AGGTGCATGG
CTGAGCCTGC AGATCGCCAT GCTCGCGTTC GTGTTCGGCA TGCTGATCGG CGTCGTATGC
GCGTCCATTT TGCATTACGG GCCGGCATCG CTAAGGCGAG TCGTCGCCGC CTACGTCATG
TTCGCGACCA ACACGCCGCA GCTCGTCCAG ATCTTCTTCC TGTTCTTCGC GCTGCCGGAA
GTCGGCGTGA CGCTGAGCCC GTTTTCGGCG GTGCTGATCG GCGCGACCTT CAATGCAGGC
GCCTACCTGT GCGAAATCCA GCGTGCCGGT TTTGCGTCGG TGCGTCGAGC GGAGATCGAG
GCGGCAGAGG TACTCGGGTT TTCGACCGCG CAGATAGTGC GTTACGTCAT CTTTCCACAT
GTGTTGAAAG TCATGTTTCC GCCGTTGTCG AACCAGTTCA TCATGATGAC GCTCGGGACT
TCGATGGCAT CGGTGTTCGG TGTCGAGGAA TTGACCGGGC GAACGTTCAA TCTCAGTTCG
CAGACGTATC TGTCCATCGA GGCGTTTAGC GTGGCGGCGG TGATGTACAT CGCGATCACG
TTGATTGCGA CGTTCGCGCT CGCGGCATTT GGGCGGTATG CCTGCCGAGC GAAGATAAAG
GTGTTTTGA
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| Protein sequence | MALQFAPILE QWPYLLAGAW LSLQIAMLAF VFGMLIGVVC ASILHYGPAS LRRVVAAYVM
FATNTPQLVQ IFFLFFALPE VGVTLSPFSA VLIGATFNAG AYLCEIQRAG FASVRRAEIE
AAEVLGFSTA QIVRYVIFPH VLKVMFPPLS NQFIMMTLGT SMASVFGVEE LTGRTFNLSS
QTYLSIEAFS VAAVMYIAIT LIATFALAAF GRYACRAKIK VF
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