Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6609 |
Symbol | |
ID | 4454121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 837369 |
End bp | 838628 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639698671 |
Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
Protein accession | YP_840231 |
Protein GI | 116686984 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0785768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCAA AGTTGCTTTC AGCAGCGCTG CTCGACACGA TCGATCGAAA TTTTGCCACG CAGGTCAATT TTCTTGCCGC ACTTGTGCGT AAGCCGTCGG ACAACCCACC CGGCGACTGC GCCGCACATG CGGACATGGC AGCCGACTGG CTGGAGACAC TGGACTTCAC CGTGGAGCGG CATTCGGTGC CCGCGCCTGA GGTCATGGCG GCCGGTATGG TCAGCGCGAC CAATCTCGTC ATTCGCCATC GTTTCGGCGA CGGCCCGGTC GTGGCGCTGA ACGCGCATGG CGATGTCGTT CCCCCGGGCG ACGGCTGGAG TGCGGATCCG TACGGTGCCG AAATCCGGGA CGGCTGGATG ATCGGCCGCG GCGCCGCCGT ATCGAAATCC GATTTCGCGA CGTATGCGTT CGCGCTCAAG GCGCTGATCG ATAGCGGTGC GCAGCTGGCC GGTACGATCG AACTTCATTT GACATACGAC GAGGAGACCG GCGGCCTGGT CGGTCCCGCC TGGCTCTTGA AGCAGGGCAT CGTGGAGCCC GACTATGCGA TCTGTGCGGG CTTCTCGTAT TCGATCACGA CCGCACATAA CGGTGCGGTG CATCTGGAGG TGACGGTGCG CGGCAAGTCG GCGCACGCTG CACGGCCCGA TACGGGCCAT GATGCGCTGG AAGCGGCTAC TGCGGTACTC GGTGCGCTTT ATGCCCATCG GAACGCACTG CGCGAGATCC GCTCGACGAC GCCCGGCATT TCGCATCCGA CGCTCGTGGT TGGCCTGATC GAAGGGGGGA TCAATACGAA CGTCGTGCCG GACAAGGTGA CGTTCCGGCT CGACCGGCGC GTCATTCCGG AGGAATCGCC TCACGACGTG GTGAGCGAGC TGAAGACGCT GATCGGCATG GCAGTCACCG GTTGGCCCGG CATCGACGTG GAGATTCGCG AAGTTCTCGT GACGTCGCCG CTGCGCGCCA TCGATGGCGC AGAGCGCTTG TCCGCTGCAC TCCAGCGGGC GGCCAAGGAG GTGTTCGGTC ACGATATCCC GACGGAAGGC GTGCCGCTCT ATACGGATGC ACGCCTGTAT TGCGAAGCAG GTGTTCCGAC GGTCATTTAC GGGGCGGGCC CGCGCACGCT GCTCGAAGCG AACGGCCACC GTGCCGACGA GCGCGTGGCA ATCGAGGACC TGCGCATCGC GACGAAAACG GTCGCGTTGG CGCTGCAGGA CCTGCTCGCG AGTCCGACGC ACGAGTCGAA TCAACCATAG
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Protein sequence | MDAKLLSAAL LDTIDRNFAT QVNFLAALVR KPSDNPPGDC AAHADMAADW LETLDFTVER HSVPAPEVMA AGMVSATNLV IRHRFGDGPV VALNAHGDVV PPGDGWSADP YGAEIRDGWM IGRGAAVSKS DFATYAFALK ALIDSGAQLA GTIELHLTYD EETGGLVGPA WLLKQGIVEP DYAICAGFSY SITTAHNGAV HLEVTVRGKS AHAARPDTGH DALEAATAVL GALYAHRNAL REIRSTTPGI SHPTLVVGLI EGGINTNVVP DKVTFRLDRR VIPEESPHDV VSELKTLIGM AVTGWPGIDV EIREVLVTSP LRAIDGAERL SAALQRAAKE VFGHDIPTEG VPLYTDARLY CEAGVPTVIY GAGPRTLLEA NGHRADERVA IEDLRIATKT VALALQDLLA SPTHESNQP
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