Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6601 |
Symbol | |
ID | 4454113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 826928 |
End bp | 827809 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639698664 |
Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
Protein accession | YP_840224 |
Protein GI | 116686977 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.272632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.281069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGG CTAACCTTAA TGTGGCGGGA AAGAAGACAA TTTCGATTGT GGATATCGTT CATTCTCGAT TCTGGCCGGT CCAATCGTTG GTCCCCCAAT TTGACGGCGA TATGGTCCAA TTGGTCCAAC AATTTGAAGA AGTCAAACCG CATCTGAAGC CAACGGGGAA CGGTTTGTCG CTCGCGGAGG CCACCATCTT GGCCCCGATC GATCAGCCGC GTCGCAACAT CTTCTGTGTC GGCAAGAACT ATCACGAGCA TGCGGCCGAG TTCCAGAACT CGGGATTCGA CAGCAGCGCA AAGAACGGCG AGCACGCGCC GGAGGCGCCG GTCATTTTCA CCAAGCCGGC GTCGACGGTG ATCGGGCCGT CGGCAAAGAT CCCACGACAT GTCGGCGTGA CCGCTCAGCT CGACTACGAG GCCGAGCTGG GTGTCGTGAT CGGCAAGGGC GGCCGGGGTA TCAAGAAGGC GGACGCAATG AATTACGTCT TCGGCTACAC CGTGATCAAC GACTTCACCG CTCGGGATCT TCAGAAGCTT CACCGCCAGT GGTTCCTCGG AAAGTCGCTC GACGGCTTCT GTCCGATGGG GCCGTTCGTG ATCACGTCGG ACGAAGTCAA CGGCCAGAAC ATCGACATCA AGTGTTGGGT GAACGGCGAA TTGCGTCAGA ACTCCAACAC GTCCAAGCTG ATCTTTGATA TCCCGACGCT GATCGAAACC CTGTCGGCCG GCATCGAACT TCAGCCGGGT GATGTGATTG CGACCGGTAC CCCGGCCGGC GTCGGTATCG GCTTCAATCC ACCCAAATTC CTGCAGAAGG GTGATGTGAT CCGAATCGAG ATCCAGAACG TCGGTGTACT CGAGAATGAG GTGGGCGAAT GA
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Protein sequence | MKLANLNVAG KKTISIVDIV HSRFWPVQSL VPQFDGDMVQ LVQQFEEVKP HLKPTGNGLS LAEATILAPI DQPRRNIFCV GKNYHEHAAE FQNSGFDSSA KNGEHAPEAP VIFTKPASTV IGPSAKIPRH VGVTAQLDYE AELGVVIGKG GRGIKKADAM NYVFGYTVIN DFTARDLQKL HRQWFLGKSL DGFCPMGPFV ITSDEVNGQN IDIKCWVNGE LRQNSNTSKL IFDIPTLIET LSAGIELQPG DVIATGTPAG VGIGFNPPKF LQKGDVIRIE IQNVGVLENE VGE
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