Gene Bcen2424_6590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6590 
Symbol 
ID4454102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp813250 
End bp814137 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content70% 
IMG OID639698653 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_840213 
Protein GI116686966 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.446699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGA TCGATCCGGC CGTGCCGCCG CTGCCGCCCG TGCGCGCCGA ATACACGCGC 
ACGCTCGACA CGCTGCCCGA CGCCGAGCGT GCGGCGCCCG CGCCGCTGCT GCGCCGCATC
GCCGGCGCCG CCTGGTTTCG CCGCAGCGTC ATCGCGCTCG TGCTGATCGC CGCATGGGAA
ATCGTCGCGC GCATCGTCGC GAACGATCTG CTCGTCCCGA CCTTCGGCGC GACGCTGGCC
GCGTTCGTGC AGGGCGTCGA GTCGGGCGAA CTGCTGGTCA AGACCGGCAT CTCGATGTCG
GTGCTGCTGC GCGGCTATGC GCTGGGCGTG CTGCTGGCGT TCGCGCTGAC GTCGCTGGCG
GTATCCACGC GCATCGGCCG CGACCTGCTG ACGATGCTCA CGTCGATGTT CAATCCGCTG
CCGTCGATCG CATTGCTGCC GATCGCGCTG TTGTGGTTCG GGCTCGGCAC CGGCAGCCTG
CTGTTCGTGC TCGTGCATGC GGTGCTGTGG CCGCTCGCGC TCAGCATCTA TACCGGCTTC
GTCGGCGTGC CCGCCACGCT GAAAATGGCC GGGCGCAACT ACGGGCTCAC GGGCCTGCGC
CAGATCGCGC TGATCCTCGT GCCGGCCGCG CTGCCGTCGA TCCTGTCGGG CCTGCGCGTG
GGCTGGGCCT TCGCGTGGCG CACGCTGATC GCGGCCGAGC TCGTGTTCGG CGCGAGCGCG
GGGCAGGGCG GCCTCGGCTG GTACATCTTC CAGAACCGCA ACGAGCTGTA TACCGACCGC
GTGTTCGCGG GCCTCGCGGC GGTCATCGTG ATCGGGCTGC TGGTCGAGAA TCTGGTGTTC
GATACGCTCG AACGCGCGAC CGTGCGTCGC TGGGGCATTC AGCACTGA
 
Protein sequence
MSTIDPAVPP LPPVRAEYTR TLDTLPDAER AAPAPLLRRI AGAAWFRRSV IALVLIAAWE 
IVARIVANDL LVPTFGATLA AFVQGVESGE LLVKTGISMS VLLRGYALGV LLAFALTSLA
VSTRIGRDLL TMLTSMFNPL PSIALLPIAL LWFGLGTGSL LFVLVHAVLW PLALSIYTGF
VGVPATLKMA GRNYGLTGLR QIALILVPAA LPSILSGLRV GWAFAWRTLI AAELVFGASA
GQGGLGWYIF QNRNELYTDR VFAGLAAVIV IGLLVENLVF DTLERATVRR WGIQH