Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6580 |
Symbol | |
ID | 4454041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 804292 |
End bp | 805596 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698643 |
Product | HipA domain-containing protein |
Protein accession | YP_840203 |
Protein GI | 116686956 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCTA GAACGCTGAT CGCATCCGCG AACGGCGTGC GCATGGGCAC GCTGACAGAC GACAAGGGGA TCTGGTCGTT CGCGTACGAC CCGCAATGGC TCGCGTCACC CGTCGCATAT CCGCTGTCGC CGGCGTTTCC GCTGCGCGCG GGCGTGTTCA CCGACACATC GACCGATCGC CCGGTCCAGT GGTTCTTCGA CAACCTGCTG CCCGAGGAGG GCATGCGCAC GTCGCTCGCG CGCGAGGCGA AGGTCGATGC GGCCGACGCG TGGGGCCTGC TCGCATACTT CGGCCGCGAA TCGGCCGGCG CGCTGACGCT GCTGGCCGAT GGCGAGCAGG AAACGCCCGG CGGCCTGCAG CCGCTGCCGC TCGACGAACT CGAGCGCCGG ATCCAGGCGA TGCCCGAGCG CGCGCTGACC GCCACCGCGC CCAAGCGCAT GTCGGCGGCC GGCGCGCAGC AGAAGCTGCT GCTGGTGTTG CGCGGCGATG CGCCCGACTA CGCGCTGCTC GAGCCGGTCG GCAGCGAACC GTCGATGCAC CTGCTCAAAC CCGACATGCG CGCGGCCGGC TATCCGCATT CGGCGATCAA CGAGTTCTTC TGCATGCAGC TCGCGAAGAA GATGGGGCTC GACGTGCCGG ACGTGCATTT CCTGCGCGCG CCGTCCGCCT GCTACGTGAT CGACCGGTTC GACCGCGACG TCGCGTCCGA ACCGGCCGCG CGCGTGCATA CGATCGACGC GATGCAACTG CTCAACTACG ACCGCGGCTT CAAGTACCAG CGCGCCAATG CGCAGGAGCT CGCCCGCGCG ATCGAGCGCA CCAGCACGCG CGCACTGACA CGCCTGTCGG TGTTCCGCTG GACCGTGTTC AACGTGGTGG TCGGCAATGC CGACGCGCAC CTGAAGAACC TGTCGTTCTT CGTCGACGCG CGCGGCTACC GGCTCGCGCC GTTCTACGAC ATCGTCAGCA CGGTCGTGTA TCACACGCCG ACGCACCGGC CCGACCATCG CGGCGATCAC TGGCCGCACT GCGAGCTGAC GATGCCGCTC GGGAATGCGA CGCGGTTCGT CGATATCGAC GCGAATGCAC TGGTCGCGTT CGGTCAGGCG CTCGGGCTCA GGGACAAGGC GGCCGCCAGC GAACTGCAGC GCTTTCTCGA GCCGCTCGAT CGTCACGTCG AGCAGACGCT CGATGAAGTG CGAAACATCG CGCATCCGGA CGCCGGGGAA ATGCGGTTGC TGAATTCGAT CGTCGCAATG CCGATCGCGG AGATGGGGCG CGCGCTGCGG CAAGCGCGCG GATAG
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Protein sequence | MAARTLIASA NGVRMGTLTD DKGIWSFAYD PQWLASPVAY PLSPAFPLRA GVFTDTSTDR PVQWFFDNLL PEEGMRTSLA REAKVDAADA WGLLAYFGRE SAGALTLLAD GEQETPGGLQ PLPLDELERR IQAMPERALT ATAPKRMSAA GAQQKLLLVL RGDAPDYALL EPVGSEPSMH LLKPDMRAAG YPHSAINEFF CMQLAKKMGL DVPDVHFLRA PSACYVIDRF DRDVASEPAA RVHTIDAMQL LNYDRGFKYQ RANAQELARA IERTSTRALT RLSVFRWTVF NVVVGNADAH LKNLSFFVDA RGYRLAPFYD IVSTVVYHTP THRPDHRGDH WPHCELTMPL GNATRFVDID ANALVAFGQA LGLRDKAAAS ELQRFLEPLD RHVEQTLDEV RNIAHPDAGE MRLLNSIVAM PIAEMGRALR QARG
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