Gene Bcen2424_6574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6574 
Symbol 
ID4454035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp797605 
End bp799167 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content72% 
IMG OID639698637 
ProductABC transporter related 
Protein accessionYP_840197 
Protein GI116686950 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.108147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCG CGACGAACGA AACCATGGAG GCGACGCGGC GCGAAGCTCG ACCCCATCGA 
TCGGCATCGC CGCCCGTCCT GAGCGTCACG GGCATCGCGA AACGCTTCGA CGCGACCGTC
GCGCTGGCGG CGCTCGACCT GTCGATCGGC GCCGGCGAAG TCGTCGCGCT GATGGGCGCG
AACGGCGCGG GCAAGTCGAC TTTCGTCAAG ATCCTGAGCG GCGCGCTGCA AGCGGACGGC
GGCACGCTGA CGCTGCGCGG CGAACCATAT CGGCCGGCGT CGCCGCACGC GGCCAAGCGG
CTCGGCGTCG CGACCGTGCA CCAGTCGGTG GCTGACGCCG TCGTGCCGAC GCTGTCGATC
GCCGACAACC TGCTGCTCGA CCGGCTGTGC GACCCGGCGT CGCCGTGGCG CGCGCCGCCG
GCCGCGCGGC GTGCCGCGGC GCGTTCGCTT GCCGCACGGG TCGGGCTCGA CGCCGATCTG
GCGGCGCCGC TCGCATCGCT GTCGCTGGCC GACCAGCAGC GCGTGACTCT GGCCCGTGCG
CTGGCCGGCC AGCCGTCGTT GCTGATCCTC GACGAGCCGA CCGCCAGCCT GTCGGCGGCG
GAGGCCGAGC GGCTGTTCGA GCTGGTGGAC GCGTTGCGCC GCGATGGCGT CGCCATCCTG
CTGGTGTCGC ATCGGCTCGG CGACTTGCGT CGTATCGCGG ATCGCGCGGC GATCGTCCGC
GATGGCCGGA TCGTCGCGGA TCTGGCCGCG CCGATCGATT TCGACGCCGC GGTGGAAACG
ATGATCGGCC GGCCGTTGCC GCGTACGCGT GCCGTGGCGC CGGAGCGGGT CGCACCGGCC
GAATCCGGGC CCGGATCAGG CTTCAGCGTG CGGCAGATCC GGCTGACGCC GACCAGCACG
CCGTTCGACC TCGATGTCCG GCGCGGCGAG ATCGTCGCGA TCGCGGGCCC GGTCGGCGGC
GGCAAGTCGC GCTTCGCGCG GACGATCTTC GGCGCGGTGC GGGCGGCCGG CGGCGAGATG
ACGCTCGACG GACGGCCATG GCGGCCACGA ACGCCCGCCG ATGCGATTCG CGCCGGCGTA
TTCCTGGCCG GCGAGGATCG CTGGCGCACG TCGCTGTTTC CCGACAGCGT CCCGTTCGCG
TCGATCGCCG GCACCATCGG CTTTCCATTT CTGGCGCGCT GGTTCGTGAG CGGTGCGGTG
CGCCGAACGC GCGAACGCAC GGCGGCCGCC GCGGCGATCG CGCGGTTCGG GATTCGCTGC
GAGGGGCCGG ACGATCGCGT CGCGCACCTG TCCGGCGGCA ACCAGCAGAA GGTCGTGCTC
GCGCGCTGGC ACGCCGAGCC GGCGCGGCTG TTGCTGCTCG ACGAACCGTT CCAGGGCATC
GATGCGGGCG CGCGCGCCGA TATCGTCGAT ACGCTGCGGC GTCATGCGCA TGAGCGCACG
ACGATCGTAT TCGTCAGCGA TCTCGAGGAA GCTGCCGAGA TCGCCGATCG TATCGTGCGG
TTCGATCGCG CGACGCTCGA TGGCCTGTCT CCGACTTCCT CCATCGTGGG TGCCTGCTCA
TGA
 
Protein sequence
MNSATNETME ATRREARPHR SASPPVLSVT GIAKRFDATV ALAALDLSIG AGEVVALMGA 
NGAGKSTFVK ILSGALQADG GTLTLRGEPY RPASPHAAKR LGVATVHQSV ADAVVPTLSI
ADNLLLDRLC DPASPWRAPP AARRAAARSL AARVGLDADL AAPLASLSLA DQQRVTLARA
LAGQPSLLIL DEPTASLSAA EAERLFELVD ALRRDGVAIL LVSHRLGDLR RIADRAAIVR
DGRIVADLAA PIDFDAAVET MIGRPLPRTR AVAPERVAPA ESGPGSGFSV RQIRLTPTST
PFDLDVRRGE IVAIAGPVGG GKSRFARTIF GAVRAAGGEM TLDGRPWRPR TPADAIRAGV
FLAGEDRWRT SLFPDSVPFA SIAGTIGFPF LARWFVSGAV RRTRERTAAA AAIARFGIRC
EGPDDRVAHL SGGNQQKVVL ARWHAEPARL LLLDEPFQGI DAGARADIVD TLRRHAHERT
TIVFVSDLEE AAEIADRIVR FDRATLDGLS PTSSIVGACS