Gene Bcen2424_6562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6562 
Symbol 
ID4454418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp784879 
End bp786558 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content72% 
IMG OID639698625 
ProductABC transporter related 
Protein accessionYP_840185 
Protein GI116686938 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC CCGATACCGT TGCGCGCGCA ACGACATCTT CCGCCGCGCC GCTGGCCCGC 
ATCGAGCGCC TGACGATCGG GTTTCGCGGC CCGCGAGGAA CACAGGCCGT CGTCGGCCCG
CTCGACCTTG CCGTGCATGC CGGCGAATGC GTCGCGCTCG TCGGCGAATC GGGTTCCGGC
AAGTCGGTCA CCGCGCGCAG TCTCGTCGGG CTGAACGGCC CGCACGCGGT GATCGATGCC
GCCCGGTTCG AGATCGCCGG CATCGATGCG CGCGGCCATC GCGAGCGCGA CTGGCGCGCG
ATACGCGGCC GCCGGATCGG CTACGTGCTG CAGGACGCGC TGGTGTCGCT CGACCCGCTG
TGGCGCGTGC GCGACCTCGT CGCGGAGGCG TTGCACGATA CGCGTCGGCG CGATGTCGCC
GCGCGCAGCG CCGACCTGCT GCGCTCGGTC GGCATCGACG ATCCCGAGCG GCGGCTGCCG
CAGTATCCGC ATCAGTTGTC GGGCGGCTTG CGGCAGCGCG TACTGATCGG CACCGCGATC
GCGGGCGGCG CGTCGCTGCT GATCGCCGAC GAGCCGACCA CGGCGCTGGA CATGACCGTG
CAACGCCAGA TCCTGTCACT GCTGCGTGCG CGCCGGGACG CCGGCGACGC GATCCTGCTG
ATCAGCCACG ACCTCGCGGT CGTCGCGGAG CTGGCCGACC GCGTGCTGGT GATGCGCGCG
GGCCAGGTCG TCGAACAGGG GTCGGCACGC GACGTGCTGA GCGCACCGAC GCATCCGTAC
ACGCGTGCGT TGCTCGCGGC GATTCCCACC GCCGCGTCGC GCGGGTTCCG GCTGGCGACC
GCCGAGCGCG TGCCGCTGCC GCCGAAGCGC ATCGACGCGC AGGCACCGGT GCTGGCCGTC
GACGCGCTGA CGAAGCGCTA CGGCGGACGC GATGCGCCGC CCGCCGTCGA CGGCGTGTCG
TTCTCGCTCG CGCGCGGCGA GACGCTCGGC ATCGTCGGTG AATCCGGTTC CGGCAAATCG
ACGGTCGCGC GGATCGTGCT CGGGCTCGTC GAACCCGACG CCGGCACCGT CACGCTCGAC
GGCCAGCCAT GGAACGGCAT CCCCGAAGCC GCGCGGCGCA CCCGCCGTGC GCGGCTGCAG
CTGATCGCCC AGGACCCGTA CAGTTCGTTC GATCCGCGCT ATTCGGTCGG CCGGATCATC
GGCGAAGGGC TCGAGGTGGT CGGACTCCAC GGCGACGCGC GCCGCCGCCG CGTGCTGCAA
CTGCTCGACG AAGTGCAGCT CGGTGCGGCG TGCCTCGACC GTTATCCGCG CGAATTGTCC
GGTGGCCAGC GCCAGCGCGT CGCGATCGCG CGCGCGTTCG CGTCCAACCC GGCACTGCTC
GTCGCGGACG AACCGGTCAG CGCGCTCGAC GTGTCGATCC AGGCGCAAGT GCTCGACCTG
CTCGCCGATC TGCAGGCCGA ACACGGCACC GCGATGCTGT TCATCTCGCA TGACCTGGGT
GTGGTGCATC ACGTGGCCGA CCGGATTCTC GTGATGCGAC GCGGCCGCGT GGTCGAAAGC
GGGCCGGTCA CGCAGGTATT CGACGCGCCG TCGCACCCGT ATACCGCGTC GCTTCTCGAC
GCACTGCCCA CGCTGCCCGG CGGCACGGCT ACCGCGCCGA CGCTCACCGC GCTCGCATGA
 
Protein sequence
MSTPDTVARA TTSSAAPLAR IERLTIGFRG PRGTQAVVGP LDLAVHAGEC VALVGESGSG 
KSVTARSLVG LNGPHAVIDA ARFEIAGIDA RGHRERDWRA IRGRRIGYVL QDALVSLDPL
WRVRDLVAEA LHDTRRRDVA ARSADLLRSV GIDDPERRLP QYPHQLSGGL RQRVLIGTAI
AGGASLLIAD EPTTALDMTV QRQILSLLRA RRDAGDAILL ISHDLAVVAE LADRVLVMRA
GQVVEQGSAR DVLSAPTHPY TRALLAAIPT AASRGFRLAT AERVPLPPKR IDAQAPVLAV
DALTKRYGGR DAPPAVDGVS FSLARGETLG IVGESGSGKS TVARIVLGLV EPDAGTVTLD
GQPWNGIPEA ARRTRRARLQ LIAQDPYSSF DPRYSVGRII GEGLEVVGLH GDARRRRVLQ
LLDEVQLGAA CLDRYPRELS GGQRQRVAIA RAFASNPALL VADEPVSALD VSIQAQVLDL
LADLQAEHGT AMLFISHDLG VVHHVADRIL VMRRGRVVES GPVTQVFDAP SHPYTASLLD
ALPTLPGGTA TAPTLTALA