Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6548 |
Symbol | |
ID | 4454009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 773213 |
End bp | 774640 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639698611 |
Product | secretion protein HlyD family protein |
Protein accession | YP_840171 |
Protein GI | 116686924 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGATG CGATCCTGTG CCCGTTGTCC GTTCGTGAGC GATGGTGCGT CGCGGTCCGG CGCGCGTTGA CGCCCGGACC GCGACGCACC GGCGCGCCGG ACGCGTTCGC GCCGGCGGTG GCCGGTGTCG CCCTGTCGAC GCCGATGAGG CCGATGGCGC CGATGCGCGT GCCTTGGCCG GCGTTAGCGC CTGCGTTCCA GCGCTGGTCC ACCGCCATCG CCCGTGCAGG CGACGGCCAG TCCGGCGGCG GCAGCGGCTC GGGCGCCGCG CCAGGCCGCA ACGGCGAGCA CTCGACCGAC GCGCCGGGCG GCGGTGGCGG CGACGACCAT CCGCACGACG ACCGCGGCGG CCGCACCGGC GGCGACGGGG ATGGCAACGA CGGCGAACGC AAGCGGCCCG GCAAGAAGCC GCTGATCATC CTGGGCGCGG TGGTGTTGGT GCTGCTCATC GGCGGGCTCG TGTGGTGGTT CGCGACGCGC AACCAGGAAA GCACCGACGA TGCGTATACC GACGGCAACG CGATCGCGGT CGCGCCGCAC GTGTCCGGCT ACGTGACGCG CCTGGCGGTC GACGACAACA CCTTCGTGCG GCGCGGCGAC GTGCTCGTCG AGATCGATCC GCGCGACTAC CGCGCGCAGG TCGACGCGGC GCAGGCCCAG CTCGGTCTCG CGCAGGCGCA GCTCGACGCG GCGCGCGTGC AGCTCGATAT CGCGCGCGTG CAGTATCCGG CCCAGTACCG GCAGGCGCGC GCGCAGATCG AATCGGCGGA AGCCGCGTAC CGGCAGGCGC TCGCCGCGCA GTCCCGCCAG CGGGCGGTCG ATGCGCGCGC AACCTCGCAG CAGGCGATCG ACGCGGCCGA TGCGCAGCGC GCGACCGCCG ACGCGAACGT CGCGATGGCC CAGGCGCAGG CCCGCACCGC GAGCCTCGTG CCGCAGCAGA TCCGGCAGGC CGAGACCGCC GTCGAGGAAC GCCGCCAGCA GGTGCTGCAG GCACGCGCGC AGCTCGAGAC GGCCAACCTG AACCTGTCGT ACTGCGAGAT GCGCGCGCCG TCCGACGGCT GGGTCACGCG GCGCAACGTG CAACTGGGCT CGTTCCTGCA ACCGGGCACG TCGATCTTCT CGATCGTCAC GCCGCGCGTG TGGGTCACCG CGAATTTCAA GGAGTCGCAG CTCGAGCGGA TGCGCATCGG CGACCGCGTC GACGTGTCGG TCGACGCGTA TCCCGATCTC GACCTGCACG GCCACGTCGA CAGCATCCAG CTCGGCAGCG GCTCGCGTTT CTCCGCGTTC CCGACCGAGA ACGCGACTGG CAACTTCGTG AAGATCGTGC AGCGCGTGCC GGTGAAGATC GTGCTCGACG GCCCGCTGCC GACCCGTCCA CCGCTCGGTC TCGGCCTGTC GGCCGTGCCG ACCGTTCACC TCAAATGA
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Protein sequence | MPDAILCPLS VRERWCVAVR RALTPGPRRT GAPDAFAPAV AGVALSTPMR PMAPMRVPWP ALAPAFQRWS TAIARAGDGQ SGGGSGSGAA PGRNGEHSTD APGGGGGDDH PHDDRGGRTG GDGDGNDGER KRPGKKPLII LGAVVLVLLI GGLVWWFATR NQESTDDAYT DGNAIAVAPH VSGYVTRLAV DDNTFVRRGD VLVEIDPRDY RAQVDAAQAQ LGLAQAQLDA ARVQLDIARV QYPAQYRQAR AQIESAEAAY RQALAAQSRQ RAVDARATSQ QAIDAADAQR ATADANVAMA QAQARTASLV PQQIRQAETA VEERRQQVLQ ARAQLETANL NLSYCEMRAP SDGWVTRRNV QLGSFLQPGT SIFSIVTPRV WVTANFKESQ LERMRIGDRV DVSVDAYPDL DLHGHVDSIQ LGSGSRFSAF PTENATGNFV KIVQRVPVKI VLDGPLPTRP PLGLGLSAVP TVHLK
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