| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6540 |
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| Symbol | |
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| ID | 4454001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 766887 |
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| End bp | 768722 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639698603 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_840163 |
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| Protein GI | 116686916 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.230604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAG TGGCGGATTT CATCGTCGAG CGACTGTACG ACTGGGGCGT GCGCCGCATC
TACGGCTACC CGGGCGACGG CATCAACGGC TTTTTCGGCG CGCTGAACCG TGCGGACGGC
AAGATCGAAT TCATCCAGGC GCGCCACGAG GAGATGGCAG CCTTCATGGC GTCCGCGCAT
GCAAAATTTA CAGGCGAGCT CGGCGTATGC GTCGCGACGT CGGGCCCCGG CGCCGCGCAC
CTCGTGACGG GCCTGTACGA CGCGCGGCTC GATCACATGC CGGTGCTCGC GATCGTCGGC
CAGCAAGCGC GCGCGGCGCT CGGCGGCCAC TATCAGCAGG AGGTGGATCT TCCGGCGCTT
TTCAAAGATG TTGCAGGCGC ATTCGTTCAG CTTGCGACGG TGCCGGGCCA GGTGCGCCAT
CTGGTCGACC GCGCGGTGCG CACCGCGCTC GGCGCGCGCA CGGTCACCGC GCTCGTGCTG
CCGAACGACC TGCAGGAGCT CGATTACGCG CCGCCGAAGC GTGCGCACGG CACCGTACAT
TCGGGCGTCG GCTACACCGC GCCGAAAGTC GTGCCGTATG CGGACGACCT GCGGCGCGCG
GCCGACGTGC TCAACGCGGG GTCGAAAGTC GCGATGCTGG TGGGTGCCGG CGCGCTGAAG
GCGACCGACG AGGTGATCGC GGTGGCCGAC CGGCTCGGCG CGGGCGCCGC GAAAGCGCTG
CTCGGCAAGG CCGCGCTGCC GGACGACCTG CCGTGGGTCA CCGGCTCGAT CGGGCTGCTC
GGCACCAAGC CGAGCTACGA ACTGATGACC GAATGCGACA CGCTGCTGGT TATCGGCTCG
GGTTTTCCGT ATTCGGAATT CCTGCCGAAG GAAGGCCAGG CGCGCGGCGT GCAGATCGAC
CTGAAGGCCG ACATGCTGAG CCTGCGTTAC CCGATGGAAG TCAACCTCGT CGGCGACAGC
GCCGAGACGC TGCGCGCGCT GCTGCCGCTG CTGAACGAGC GGCGCGACAC CGCGTGGCGC
GACCGGATCG CGCAATGGAA CCATGACTGG CACGACGCGC TCGCGGCGCG CGCAGCTGCG
AAGGCCAGCG CGGGGCGCGG CGTGAATCCG CAGCGCGCGT TTACCGAGCT GTCGCCGCGC
CTGCCCGACG ACGTGATCCT GACGAGCGAT TCGGGCTCCT GCGCGAACTG GTATGCACGC
GACCTGATGA TGCGGCGCGG GATGATGGGT TCGTTGTCCG GCGGCCTCGC GTCGATGGGC
GCCGCGGTGC CCTACGCGAT CGCCGCGAAG TTCGCGTACC CGGTGCGCCC GGTGATCGCG
ATGGTCGGCG ACGGCGCGAT GCAGATGAAC AACATGGCCG AGCTGATCAC GGTCGCGAAA
TACTGGCGCC AGTGGCCCGA CCCGCGCTGG ATCTGCATGG TGCTGAACAA CGAGGACCTG
AACCAGGTCA CGTGGGAGCA GCGCGTGATG GAGGGCGACC CGAAGTTCGA CGCGTCGCAG
CAGATCCCGA ACGTGCCGTA CTACCGCTTC GCGACGCTGC TCGGCCTCAA GGGCATCTAC
GTCGACGATC CGGAACAGCT CGGCGCCGCG TGGGACGAAG CGCTCGCGTC CGATCGGCCG
GTCGTGCTCG AGGTGAAGAG CGACCCCGAA GTGCCGCCGC TGCCGCCGCA CGTGACGCTG
CAGCAGGCGA AGCATTTCGC CGAAACGCTG GTGAAAGGCG ACCCGCGCGA GGGCAACGTG
ATCGTCGAGA CCGCGCGGCA GGTGTTGTCG GCCGTGCTGC CGGGCAACGG CGAACATGGC
GGCAAGAGCG GCAAGGGAGG GAAAGGCGAA TCGTAA
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| Protein sequence | MATVADFIVE RLYDWGVRRI YGYPGDGING FFGALNRADG KIEFIQARHE EMAAFMASAH
AKFTGELGVC VATSGPGAAH LVTGLYDARL DHMPVLAIVG QQARAALGGH YQQEVDLPAL
FKDVAGAFVQ LATVPGQVRH LVDRAVRTAL GARTVTALVL PNDLQELDYA PPKRAHGTVH
SGVGYTAPKV VPYADDLRRA ADVLNAGSKV AMLVGAGALK ATDEVIAVAD RLGAGAAKAL
LGKAALPDDL PWVTGSIGLL GTKPSYELMT ECDTLLVIGS GFPYSEFLPK EGQARGVQID
LKADMLSLRY PMEVNLVGDS AETLRALLPL LNERRDTAWR DRIAQWNHDW HDALAARAAA
KASAGRGVNP QRAFTELSPR LPDDVILTSD SGSCANWYAR DLMMRRGMMG SLSGGLASMG
AAVPYAIAAK FAYPVRPVIA MVGDGAMQMN NMAELITVAK YWRQWPDPRW ICMVLNNEDL
NQVTWEQRVM EGDPKFDASQ QIPNVPYYRF ATLLGLKGIY VDDPEQLGAA WDEALASDRP
VVLEVKSDPE VPPLPPHVTL QQAKHFAETL VKGDPREGNV IVETARQVLS AVLPGNGEHG
GKSGKGGKGE S
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