Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6532 |
Symbol | |
ID | 4453993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 757051 |
End bp | 758175 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639698595 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_840155 |
Protein GI | 116686908 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCGGC GTCGCCCCGC TTTCTTCGCA GTCGCTTCCG CACTGCCCCT CGCGCTAGCC GCCTGCAGCG GAAAAGCGCC GTCCGATCCG CGCACGGAGG CGCCGCTCGT GCGTACCGCC GTCGTGCAGG CGGCCGTTCC CGCGTCCCGC TCGTTCACCG GCACCGTCGC CGCGCGCGTG CAGAGCGATC TCGGCTTCCG GGTAGCCGGC AAGGTGCTGG AGCGGCTCGT CGATACCGGT CAAACCGTCA AGCGCGGCCA GCCGCTGATG CGGCTCGACC CGGTCGACCT GAAGCTCGCG GCGCGCGCCC GCGACGAAGC CGTCGCCGCC GCACGGGCGC GCGCGCGGCA GACCGCCGAG GACGAAGCGC GCTACCGCGA CCTGCGCGGC ACCGGCGCGA TATCGGCATC GGCCTACGAC CAGATCAAGG CCGCCGCCGA TGCCGCGAAA GCGCAACTGA GCGCCGCCGA GGCCGACGCC GACGTCGCGC GCAACGCGAC CGGCTATGCG CAACTCGTCG CGGACGGCGA CGGCGTCGTC ATGGAAACGC TCGCGGAGCC CGGCCAGGTC GTCAGCGCGG GGCAGCCGGT GGTGCGGCTC GCGCACGCCG GCAGCCGCGA AGCCGTGATC CAGTTGCCCG AAACCCTGCG TCCGGCGATC GGGTCGGTCG CGCAGGCCGG GCTGTTCGGC AAGCCGGACA TCAGCGTCCC CGCGACGCTG CGCCAGCTTT CCGATACCGC GGATGCGAGA ACGCGTACTT TCGACGCGCG CTACGTGCTG CAAGGCGCGC TGGCCGACGC CCCGCTGGGC GCGACCGTCA CGATCCGCAT CCCGGACGAC GCGCGCGCGG CTTCGCAACG CGGCATGCAG GTGCCGATCG GCGCGCTGCT GGACGCGGGC AAAGGGCCGG GCGTGTGGGT CGTCGCCGGC GAACCGGCCA AGGTGACGTG GCGGCCGGTC AAGGTCGAGC ATCTCGACGA CGACAGCGCG CGCGTGGCCG GCGACGGCGC GCTCAAGCCA GGCGAGCGCG TCGTCGCGCT CGGCGCGCAG CTGCTGCGCG AAGGCGAAGC GGTGCGCATG TCCGCGCCGG CCGCGACGGT CGCGAGCGCA GGAGCACGGC CGTGA
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Protein sequence | MVRRRPAFFA VASALPLALA ACSGKAPSDP RTEAPLVRTA VVQAAVPASR SFTGTVAARV QSDLGFRVAG KVLERLVDTG QTVKRGQPLM RLDPVDLKLA ARARDEAVAA ARARARQTAE DEARYRDLRG TGAISASAYD QIKAAADAAK AQLSAAEADA DVARNATGYA QLVADGDGVV METLAEPGQV VSAGQPVVRL AHAGSREAVI QLPETLRPAI GSVAQAGLFG KPDISVPATL RQLSDTADAR TRTFDARYVL QGALADAPLG ATVTIRIPDD ARAASQRGMQ VPIGALLDAG KGPGVWVVAG EPAKVTWRPV KVEHLDDDSA RVAGDGALKP GERVVALGAQ LLREGEAVRM SAPAATVASA GARP
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