| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6520 |
|---|
| Symbol | |
|---|
| ID | 4453947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 742770 |
|---|
| End bp | 743642 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639698583 |
|---|
| Product | PhzF family phenazine biosynthesis protein |
|---|
| Protein accession | YP_840143 |
|---|
| Protein GI | 116686896 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0912962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG TACAACGTGT GCGGCTTGTA CGGGTATTTT CCATCACCGA CGAGGGCGGC
AATCCGGCCC CGGTTGTGCT CGACGCGAAC GGCTGGTCCG ACGCGCAAAT GAAAGAGGTG
GCCCGCGCGT ATGGTCTGGA AAGCGGGTTT GTGATGCGCG CCGTCGATCC GCACCATGAT
TTTCGCTTCC GCTTTTTTGT GCCCAACCAC GAGATGGAGA TGTGCGGACA CGCGACGCTG
GGCGCATTGT GGCTGCTGCG TCACACGGGC GCATGGCGCA CGAACACGGC GCTGATTGAA
ACGCTGAGCG GCAGCATCGA AGCGCGGTAC GACGCGTCCG ACGCGCGGAT CGAAGTCAGC
CAGCCGGCGG GACGCGTCGA GCCGGTTGTC GACGCGGCGC TCATTGCCAG GACACTCGAT
GCATTGAACC TCGATGCGGG CGACCTGCTG CCGCTCGACA TCGTCAACGC AACGACGAGC
CGCACCAAAA CGCTGGTGCC GGTCCGCACG ACCTCACGGC TGAATGCGAT CATGCCGAAA
CTCGACACAA TCGAAGCGCT ATGCGACGCG CTGTCGTCGA CCGGTCTGTA TCCGTTTGCG
CTCGATGCCA ATGCACCGCG CGTGTTCGAC GCACGGCAAT TTCCGCGCGC GTCCGGCTAT
TCGGAAGACG CGGCGACCGG CATCGCAGCG GCAGCGCTCC TGTACGGCGC GCATCGCCAT
GGGCTCGTCA CCGGAGCGGG ACGCGGCATC GTCGTGCGTC AGGGTGCGGC GATGGGACGC
CCGTCCGCGA TCACGGTGAA CTTTCGCGAT CCGGCCGATG CAAGCAGCGG TTGCTGGCTC
AGTGGCCCGG TTGGTCTGAT GGACGAGGCC TGA
|
|---|
| Protein sequence | MSIVQRVRLV RVFSITDEGG NPAPVVLDAN GWSDAQMKEV ARAYGLESGF VMRAVDPHHD
FRFRFFVPNH EMEMCGHATL GALWLLRHTG AWRTNTALIE TLSGSIEARY DASDARIEVS
QPAGRVEPVV DAALIARTLD ALNLDAGDLL PLDIVNATTS RTKTLVPVRT TSRLNAIMPK
LDTIEALCDA LSSTGLYPFA LDANAPRVFD ARQFPRASGY SEDAATGIAA AALLYGAHRH
GLVTGAGRGI VVRQGAAMGR PSAITVNFRD PADASSGCWL SGPVGLMDEA
|
|---|
| |