| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6499 |
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| Symbol | |
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| ID | 4454652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 719180 |
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| End bp | 722572 |
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| Gene Length | 3393 bp |
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| Protein Length | 1130 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639698562 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_840122 |
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| Protein GI | 116686875 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.145776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCCA CACCACCGTT CGCTCCCCAT CTCTACTTCT GCGACGCCCG CCTCGTCGGA
ACGCTCGACG CGTGGCCGCA AACCTTCGCG CATATCGCGG GGATGGGCTT CGATCACGTG
CTGGTCGGCG CGTTCTGGGC CGCGAGCGTG GCCGGCTTTC CGCGCCACGT GGCCGATTTC
CGTCGGCCGG CCCAGTCGTT CGAGACACGC GCGAGCGCGC TCGAAACCTT CTCGCGGCTC
GCGCAACTGG CGAAAGGCCA CGGGCTGCGC CTGCTGCTCG AAGTCGTGCC CGACCGCATC
GCGCGCGACA ATCCGCTGCG CACCGAGCAT CCTGACTGGT ACGCCGAGCG TACGCACGAC
GACGCGCTGA TCGATCCGCG CGGCACCGCG CACGCACTGG ATATCGCGCA TGCGAACACC
GCCGACGAAG CGGTGCGCGA CGCGCTGTCC GCATGGTGGT GCGCGCATCT CGCGACGTAC
GCCGACGCGG GCGCGGCCGG CTTCCTGATC GACGCGCCGC ATCACCTGCC GGCCGACTGG
TGGCCGGGCT GGCGCGCGGC GCTGCGCCGT GCGCGCCCGG ACGTCGCGGT GCTCGCCGGG
GTGCCCGGCC ATGCACGCGA CGCGCTCGCG CAACTCGAAG CCGCCGGGTT CGACGCGGTG
TTTTCGTCGG TACGCTGGTG GGACCTGCGC GCGCCGTGGT TCGCGGACGA GCACCGGCTG
CTGCGCCGGA TCGGCGCGCC GATCGCGTTC CCTGATGCGC CCGACGGCCC GCGTCTGGCC
GACGACTGGC CCGACGCGCC GGACGACACC GTCGCCCGCG CGTATCGCCG CGCGCTGTGG
ACGGCCGCGG CCGTCGGCAC CGGCTGGCTC GTGCCGATGG GCTTCGAGCG CGGCGTGACG
GTGCCGTTGA TGGCGCGCGA CGCGGATGCC GCGCGCTACC GCGCCGCGTT CGAGCACGCG
CGTTTCGACC TGTCGGGCGC GCTCGCCGAC GCGAACGCGT GGCGCCGCGC CACGCCCGTC
GCGGCGGCGC GCGGCGAAAT CGTGCAACTG AGCGCGCCGG GCGCGAGCGC GACCGCGCTG
CTGCGCGGCA CCGGGCCGCT GCTCGAACAC GACGACGCGG CGTTGCTGAT CGCGTTGAAT
CCCGATCTCG ACGCGCCTGC GACGGTCGAC CCCGCGACGA TCCTGCCCGG CGTGCCGGGC
GGCTTCACAC GCGTCGTCAC GCAGGACGGC GCGCGCACGC ATCCGCCGGC CGCGCTCGAG
CCGTTCACGC TCGCGCCCGG CGCGTATGCG CTGCTGCATG CATGGCGGGC GCCGCCCGTC
ACGACGCGCG CCGACGCCGC GCGCGAACGC ACCGCGCTGT CGGCCGCGCT CGTGGCCGAC
CGGATCGCGA TCGAGCGCGT CGAGCCGTCG GTCGACGACG GCCGCTTCGC GATCAAGCGC
GTGATCGGCG AGCCGCTCGT CGTCAGCGCG TCGATCTTCA CGGACGGGCA CGCGCATCTC
GCGGCCGTGC TCCAGTGGCG CGCCGCCGAC GACGACACCT GGCGCGAAGT GCCGTTCGAA
GCCGAGCCGA ACGACCGCTG GCACGCACGC GTCACGCTCG ACCGGCTCGG CCGCCATGAA
TTCCGCGTGG TCGCGTGGCG CGACGACTGG GCGTCGCTTG TCACCGATAT CGCGAAGAAG
CGCGCGGCCG GCCAGGACGT GACGCTGGAG GTGCGCGAAG CGCAACTGCT GCTCGCCACC
GCGCTGAAGC TCGCCGATCC TGTCGATCCG CGCGCGCTCA AGCAGATGGA GCGGCTCGCC
GCCGAGCTCA AGGACGCGTC GGCCGACGAC CGCCTCGCGT TGATCGGCGG GCCCGCGCTC
GCCGACGCCT TCGCGGCGCT GCGCTACCGC CCGTTCGTCA CGCACGACGC GACGACCTAC
CCGGTCGACG TCGAACGCCG CCAGGCGCGT TTCTCGAGCT GGTATGAGAT GTTTCCGCGC
TCGGCGAGCG ACGATCCGCA CCGGCACGGC ACGTTCGACG ACGTGATCGC GCATTTGCCG
CGCATCCGCG ACATGGGTTT CGACGTGCTG TATTTTCCGC CGATCCACCC GATCGGCACG
TCCGCGCGCA AGGGCCGCAA CAACAGCCTG ACCGCCGGCC CCGACGACGT CGGCAGCCCG
TACGCGATCG GCTCGCCCGA CGGCGGTCAC ACGGCCGTGC ATCCGCAGCT CGGCACGCTC
GAGTCGTTCC GCGCGCTGGT CGACGCCGCG CGCGGCCACG GGCTTGAGAT CGCGCTCGAT
TTCGCGATCC AGTGCTCGCC CGATCATCCG TGGCTCGCCG CGCATCCAGG CTGGTTCGCG
TGGCGGCCCG ACGGCTCGCT GCGTTTCGCG GAGAATCCGC CGAAGCGCTA CCAGGACATC
GTCAACCCCG ATTTCTACGC GCCGGACGCG CTGCCCGACC TGTGGCTGGC GCTGCGCGAC
GCGGTGCTGT TCTGGGTCGA CGCGGGCGTG CGGATCTTCC GCGTCGACAA CCCGCACACG
AAGCCACTGC CGTTCTGGGC ATGGATGATC GCCGACGTGC GCGGCCGGCA TCCGGACGTC
GTGTTCCTGT CCGAGGCGTT CACGCGGCCG GGGATGATGT ACCGGCTCGC GAAAGTCGGC
TTCTCGCAGT CGTACACGTA CTTCACGTGG CGCGAGTCGA AGCGCGACTT CATCGACTAC
CTGACCGAGC TGACGGCCGG CCCGCCCCGC GAATTCTTCC GGCCGAACTT CTTCGTCAAC
ACGCCCGACA TCAATCCGCG CCACCTGCAG AACGCGCCGC GTTCGCAGTT CGTGATCCGC
GCGGCGCTCG CGGCGACGCT GGCCGGCTCG TGGGGCCTGT ACTCGGGCTT CGAGCTCGGC
GAATCGGCGC CGCTGCCGGA CAGCGAGGAA TACGCGGATG CCGAGAAATA CGAGCTGCGC
GCGCGCGACT GGAGCAAGGC CGCGCACATC GGCACGGAAA TCGCGCGGCT GAACCGCGCG
CGGCGCGATC ACGCGGCGCT GCAGACGCAT CTCGGGCTCA CGTTCGTCGA GGCCGACAAC
GATTCGGTGC TCGTGTTCAT GAAGGCCACA CCTGCGTTCG ACAGCGTGGT GATCGTCGCG
ATCAGCCTCG ACCCGTGGCA TCCGCAGGCC GCGAACTTCA CGCTCGATGC GGCGCTGTGG
CGCGGCCTCG GGCTGGCCGA CGGCGAACCG CTCGATGCGC TCGAACAGGA CGCCGCGCAC
GCGGAGACCT GGCGCGGCCA TCGCCAGTAC GTGTCGCTCG ATCCGCACGT GCGGCCGTAC
GCAATCTGGC GGCTCGCGCC GTCTCCGGGC GCCGCGCGGG CGGCGGCACC CGAACCGGAC
TCCGCCCGCC GCCCTTCGGG AGCGCATGCA TGA
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| Protein sequence | MDSTPPFAPH LYFCDARLVG TLDAWPQTFA HIAGMGFDHV LVGAFWAASV AGFPRHVADF
RRPAQSFETR ASALETFSRL AQLAKGHGLR LLLEVVPDRI ARDNPLRTEH PDWYAERTHD
DALIDPRGTA HALDIAHANT ADEAVRDALS AWWCAHLATY ADAGAAGFLI DAPHHLPADW
WPGWRAALRR ARPDVAVLAG VPGHARDALA QLEAAGFDAV FSSVRWWDLR APWFADEHRL
LRRIGAPIAF PDAPDGPRLA DDWPDAPDDT VARAYRRALW TAAAVGTGWL VPMGFERGVT
VPLMARDADA ARYRAAFEHA RFDLSGALAD ANAWRRATPV AAARGEIVQL SAPGASATAL
LRGTGPLLEH DDAALLIALN PDLDAPATVD PATILPGVPG GFTRVVTQDG ARTHPPAALE
PFTLAPGAYA LLHAWRAPPV TTRADAARER TALSAALVAD RIAIERVEPS VDDGRFAIKR
VIGEPLVVSA SIFTDGHAHL AAVLQWRAAD DDTWREVPFE AEPNDRWHAR VTLDRLGRHE
FRVVAWRDDW ASLVTDIAKK RAAGQDVTLE VREAQLLLAT ALKLADPVDP RALKQMERLA
AELKDASADD RLALIGGPAL ADAFAALRYR PFVTHDATTY PVDVERRQAR FSSWYEMFPR
SASDDPHRHG TFDDVIAHLP RIRDMGFDVL YFPPIHPIGT SARKGRNNSL TAGPDDVGSP
YAIGSPDGGH TAVHPQLGTL ESFRALVDAA RGHGLEIALD FAIQCSPDHP WLAAHPGWFA
WRPDGSLRFA ENPPKRYQDI VNPDFYAPDA LPDLWLALRD AVLFWVDAGV RIFRVDNPHT
KPLPFWAWMI ADVRGRHPDV VFLSEAFTRP GMMYRLAKVG FSQSYTYFTW RESKRDFIDY
LTELTAGPPR EFFRPNFFVN TPDINPRHLQ NAPRSQFVIR AALAATLAGS WGLYSGFELG
ESAPLPDSEE YADAEKYELR ARDWSKAAHI GTEIARLNRA RRDHAALQTH LGLTFVEADN
DSVLVFMKAT PAFDSVVIVA ISLDPWHPQA ANFTLDAALW RGLGLADGEP LDALEQDAAH
AETWRGHRQY VSLDPHVRPY AIWRLAPSPG AARAAAPEPD SARRPSGAHA
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