| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6491 |
|---|
| Symbol | |
|---|
| ID | 4454260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 702768 |
|---|
| End bp | 704081 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639698554 |
|---|
| Product | phosphatidylserine decarboxylase-related |
|---|
| Protein accession | YP_840114 |
|---|
| Protein GI | 116686867 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00510821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCGC CCGGGCAAGC GTCTTGCTGC ATCGATTCGA CCGAAACCGT TCCGGAGGAG
ACGATGCCGA CGAATCGCAA CACGCCGCCC GCCACCCGCC GCCGCCTCGG CGGATGGATG
GCCAGCGAGG AAGCGCACAT GGCCGCGTTC CGCGAAAAAA TCGCGGCCGA AGCGCGCGCG
CATGCCGGCG ACCGGTTGCG CACGCCGGCC GTTCAGGAAC TCGCGCGGCT GTTCGACGAC
AACGCCGTGC TGCGCATGAG CCTCACCCGC GCGATCGACG AAGCGCGCGA AGCGGGATAC
CGGCTCGGCT ACGCGTCGAT CGGCGAGCTG ATGACGGTGA TCGACCATCT GATGACCTAC
ACGCCGCCAT TCAGCGAGGA AAGCCTGATC GTGTGCCCGG TGAACGCGTT CCTCGACTGG
CCGATGTGCA TGCCGTCGGG CCACGCGGTG TTTCGCGACG CCGCCGTCAA CGCGCAGTTC
AAGCGCGTGC TGAACGTCTG GTGCGACTTC CTCGGCGGCC CGCATTCGCG CGCGCATCTC
GACACGTCGG CGCCCGACGG CTGGTTCTGC GATGAAGCAC GCAAGCGTCT CGGGCTGTCG
CAGTTCCAGT ATCGCGAAGA CCAGCCGCAC TGGGGCTTCG ATTCGTGGAA CGACTTCTTC
ACGCGGCGCT TTCGCGACGG CGCGCGGCCC GTGGCGGCGC CCGACGATCC GCACGTGATC
GTCAGCGCGT GCGAAGCGTC GCCCTATCAC ACCGAAACCA ACGTGAAGCT GCGCGACACG
TTCTGGATCA AGTCGCAGCC GTATTCGCTG CGCGACCTCT TCACGCCCGC GCGGCTGTCG
CTCGCGGAGC GCTTCGTCGG CGGCGACGTC TACCAGGCCT ACCTCAGCGC GTACAACTAC
CACCGCTGGC ATGCGCCGGT GCGCGGCGTC GTCACGCACG CGTATCGCGT CGACGGCACC
TACTACTCGG TCGCCGAAGC GGAAGGCCCG GACCCGGCCG GGCTCAACGA CTCGCAGGGC
TACATGACGG CGGTCGCCGC GCGCGCGGTG GTCGCGATCT CGAGCGACGA TCCCGGCATC
GGGACGGTCG CGGCCGTGTT CGTCGGGATG GGCGACGTGT CGTCGTGCGT GATCGAGGTC
GTGCCGGGCC AGCGCGTCGA CAAGGGCGAC GAGATCGGCT ATTTCCAGTT CGGCGGCTCG
ACCTACTGCC TGCTGTTCGA GGCCGGCGTG ATCGACCGCT TCCTGTACGC GCCGCCGTTC
GAAGGTGAGC CGCCGGTCGT GCAGGTCAAT GCGTCCGTCG CGATCGCGCG GTGA
|
|---|
| Protein sequence | MPPPGQASCC IDSTETVPEE TMPTNRNTPP ATRRRLGGWM ASEEAHMAAF REKIAAEARA
HAGDRLRTPA VQELARLFDD NAVLRMSLTR AIDEAREAGY RLGYASIGEL MTVIDHLMTY
TPPFSEESLI VCPVNAFLDW PMCMPSGHAV FRDAAVNAQF KRVLNVWCDF LGGPHSRAHL
DTSAPDGWFC DEARKRLGLS QFQYREDQPH WGFDSWNDFF TRRFRDGARP VAAPDDPHVI
VSACEASPYH TETNVKLRDT FWIKSQPYSL RDLFTPARLS LAERFVGGDV YQAYLSAYNY
HRWHAPVRGV VTHAYRVDGT YYSVAEAEGP DPAGLNDSQG YMTAVAARAV VAISSDDPGI
GTVAAVFVGM GDVSSCVIEV VPGQRVDKGD EIGYFQFGGS TYCLLFEAGV IDRFLYAPPF
EGEPPVVQVN ASVAIAR
|
|---|
| |