Gene Bcen2424_6455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6455 
Symbol 
ID4454481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp673425 
End bp674471 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content67% 
IMG OID639698518 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_840078 
Protein GI116686831 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCT ACGACCGAAA ACGCGTCCTC GTCACCGGCG GCGCCGGCTT TCTCGGTTCG 
CATCTGTGCG AACGCCTCGT GACGGCCGGC CACGACGTGC TGTGCGTCGA CAATTTCTAC
ACGGGCACGA AGGACAACAT CGCGCACCTG CTCGATGCGC CGAATTTCGA GCTGATGCGG
CACGACGTGA CGTTTCCGCT CTACGTCGAA GTCGACGAGA TCTACAACCT CGCATGCCCG
GCGTCGCCCG TTCACTACCA GCGCGACCCC GTGCAGACGA CCAAGACCAG CGTGCACGGC
GCGATCAACC TGCTCGGCCT CGCGAAACGC GTGAAGGCGC GCATCCTGCA GGCGTCGACG
AGCGAGGTGT ACGGCGACCC CGACGTGCAT CCGCAGGACG AGCACTATTG CGGCCGCGTC
AATCCGACCG GCATCCGCGC GTGCTACGAC GAAGGCAAGC GCTGCGCGGA AACCCTGTTC
GCGGACTATC ACCGCCAGTA CGGCATCGAC GTGCGGATCG CGCGGATCTT CAACACGTAC
GGCCCGCGCA TGCACCCGGC CGACGGGCGC GTGGTATCGA ACTTCGTCAC GCAGGCGCTC
GCGGAACAGC CGTTGACCGT CTACGGCGAC GGCAAGCAGA CGCGCTCGTT CTGCTACGTC
GACGACATGG TCGATGCGTT GATCCGGCTG ATGGATGAAC CGGGCGATGC GAGCGAGCCG
GTCAATCTCG GCAGCGATGT CGAGATCGCG ATGATCGACG TCGCGCGGGA AGTCGTGCGG
ATCGTCGGCG CCAACGTGCC GATCGAATTC CGGCCGCTGC CGTCCGACGA TCCGCGCCAG
CGGCGGCCGA ATCTCGCGGC CGCGCAGAAG CGGCTCGGCT GGCGCGCGAC GACGACGTTC
GCGAACGGGC TCGCGCACAC CGCGCGCTAC TTCATTCAGC GCCAGGTCAC GCACCACGCG
CCCGGCGACC TCGTGCGCAG CACGCGCATC GCGTCGCATC TGCTCGCCCA GGTCCATACG
CAGAATCGGC CGGCGCCGAC GACGTGA
 
Protein sequence
MKGYDRKRVL VTGGAGFLGS HLCERLVTAG HDVLCVDNFY TGTKDNIAHL LDAPNFELMR 
HDVTFPLYVE VDEIYNLACP ASPVHYQRDP VQTTKTSVHG AINLLGLAKR VKARILQAST
SEVYGDPDVH PQDEHYCGRV NPTGIRACYD EGKRCAETLF ADYHRQYGID VRIARIFNTY
GPRMHPADGR VVSNFVTQAL AEQPLTVYGD GKQTRSFCYV DDMVDALIRL MDEPGDASEP
VNLGSDVEIA MIDVAREVVR IVGANVPIEF RPLPSDDPRQ RRPNLAAAQK RLGWRATTTF
ANGLAHTARY FIQRQVTHHA PGDLVRSTRI ASHLLAQVHT QNRPAPTT