Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6445 |
Symbol | |
ID | 4454295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 660591 |
End bp | 661796 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639698508 |
Product | glycosyl transferase family protein |
Protein accession | YP_840068 |
Protein GI | 116686821 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0047484 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGG CCTGGAGCCG CGCCCGCCGC ATCCTGTGCG TGCGGCTCGA CAGCATCGGC GACGTGCTGA TGACCACGCC CGCGCTGCGC GCGCTGAAGG AGAGCGGCGC CGATCGCCAG CTGACGCTGC TGACGTCGCG CACGGGCGCC GCGCTCGCGA AGCATCTGCC GATGGTCGAC GACGTGTGGA GCTACGACGC GCCGTGGGTC AAGCATCCCG ACGTGCGCGG CGATCCGGTG GCCGATCTCG ACATGATCGA CCGGCTGCTG GCGGGCCGCT TCGACGCGGC CGTGATCTTC ACCGTCTACA GCCAGAATCC GTTGCCCGCC GCGATGATGT GCTGGCTCGC CGGCATTCCG CTGCGGCTCG CGCATTGCCG CGAGAACCCG TACGAACTGC TGACCGACCG CGTGCCGGAA ACCGAGCCGG AATCGCACGT GCGCCACGAG GTCGCGCGGC AGCTCGCGCT GGTGCGTGCG ATCGGCGCGA AGACGTCCGA CTGGCGGATG GCGTTCGAGC CGGGCGACGC GGCGCGGCGT GCGGTGCACG CGCGCCTGCA GGCCGCGTTG CAGCGCATCG GCGGCGCGCG TGAGCCGGGA GCGACGCGCG CGCGCTGGCT GGTCGTCCAT CCGGGCGCGA CCGCCGCGTC GCGGCGCTGG CCGGCCGAGC GTTTCGGCGA AGCGGCCGCC GCGGTCGCGC CGCTGTTCGA CGGCATCGCG GTGACGGGCA GCGCGGACGA ACGCGCGCTG GTCGACGCGG TGTGCGAACG GGCGGGGCCG CGCGCGGTGC CGCTGGCCGG CGTGTTGCCG CTCGGCGAAC TCGGCGCGCT GGTCGAGACG GCCGACCTGC TGCTGTCGAA CAACAGCGGC CCCGTGCATC TCGCGGCCGC GCTCGGCACG CCGGTGGTCG ACCTGTACGC GCTGACCAAT CCGCAGCACA CGCCGTGGCG GGTGCCGCAC CGTGTGCTGA ACGTCGACGT GCCGTGCCGC AACTGCTATC GCAGCGTGTG CAACCAGCCC GGCCATCCGT GCCTGCGCGG CGTGAGCGTC GACGACGTCG CCGCCGCCGT GCACGCATTG CTGCGCGGCC GCGCGCGCCA TGCGCAACGC GCGGCCGAGT GGGCTGCCGC CCACGACGAA GGCGAGCCGG TCGCGGCGCA CGCATCGAAC GTGATTCCGT TCGCGCACGT CATCACGAGG AACTGA
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Protein sequence | MSTAWSRARR ILCVRLDSIG DVLMTTPALR ALKESGADRQ LTLLTSRTGA ALAKHLPMVD DVWSYDAPWV KHPDVRGDPV ADLDMIDRLL AGRFDAAVIF TVYSQNPLPA AMMCWLAGIP LRLAHCRENP YELLTDRVPE TEPESHVRHE VARQLALVRA IGAKTSDWRM AFEPGDAARR AVHARLQAAL QRIGGAREPG ATRARWLVVH PGATAASRRW PAERFGEAAA AVAPLFDGIA VTGSADERAL VDAVCERAGP RAVPLAGVLP LGELGALVET ADLLLSNNSG PVHLAAALGT PVVDLYALTN PQHTPWRVPH RVLNVDVPCR NCYRSVCNQP GHPCLRGVSV DDVAAAVHAL LRGRARHAQR AAEWAAAHDE GEPVAAHASN VIPFAHVITR N
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