Gene Bcen2424_6445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6445 
Symbol 
ID4454295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp660591 
End bp661796 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content73% 
IMG OID639698508 
Productglycosyl transferase family protein 
Protein accessionYP_840068 
Protein GI116686821 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0047484 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG CCTGGAGCCG CGCCCGCCGC ATCCTGTGCG TGCGGCTCGA CAGCATCGGC 
GACGTGCTGA TGACCACGCC CGCGCTGCGC GCGCTGAAGG AGAGCGGCGC CGATCGCCAG
CTGACGCTGC TGACGTCGCG CACGGGCGCC GCGCTCGCGA AGCATCTGCC GATGGTCGAC
GACGTGTGGA GCTACGACGC GCCGTGGGTC AAGCATCCCG ACGTGCGCGG CGATCCGGTG
GCCGATCTCG ACATGATCGA CCGGCTGCTG GCGGGCCGCT TCGACGCGGC CGTGATCTTC
ACCGTCTACA GCCAGAATCC GTTGCCCGCC GCGATGATGT GCTGGCTCGC CGGCATTCCG
CTGCGGCTCG CGCATTGCCG CGAGAACCCG TACGAACTGC TGACCGACCG CGTGCCGGAA
ACCGAGCCGG AATCGCACGT GCGCCACGAG GTCGCGCGGC AGCTCGCGCT GGTGCGTGCG
ATCGGCGCGA AGACGTCCGA CTGGCGGATG GCGTTCGAGC CGGGCGACGC GGCGCGGCGT
GCGGTGCACG CGCGCCTGCA GGCCGCGTTG CAGCGCATCG GCGGCGCGCG TGAGCCGGGA
GCGACGCGCG CGCGCTGGCT GGTCGTCCAT CCGGGCGCGA CCGCCGCGTC GCGGCGCTGG
CCGGCCGAGC GTTTCGGCGA AGCGGCCGCC GCGGTCGCGC CGCTGTTCGA CGGCATCGCG
GTGACGGGCA GCGCGGACGA ACGCGCGCTG GTCGACGCGG TGTGCGAACG GGCGGGGCCG
CGCGCGGTGC CGCTGGCCGG CGTGTTGCCG CTCGGCGAAC TCGGCGCGCT GGTCGAGACG
GCCGACCTGC TGCTGTCGAA CAACAGCGGC CCCGTGCATC TCGCGGCCGC GCTCGGCACG
CCGGTGGTCG ACCTGTACGC GCTGACCAAT CCGCAGCACA CGCCGTGGCG GGTGCCGCAC
CGTGTGCTGA ACGTCGACGT GCCGTGCCGC AACTGCTATC GCAGCGTGTG CAACCAGCCC
GGCCATCCGT GCCTGCGCGG CGTGAGCGTC GACGACGTCG CCGCCGCCGT GCACGCATTG
CTGCGCGGCC GCGCGCGCCA TGCGCAACGC GCGGCCGAGT GGGCTGCCGC CCACGACGAA
GGCGAGCCGG TCGCGGCGCA CGCATCGAAC GTGATTCCGT TCGCGCACGT CATCACGAGG
AACTGA
 
Protein sequence
MSTAWSRARR ILCVRLDSIG DVLMTTPALR ALKESGADRQ LTLLTSRTGA ALAKHLPMVD 
DVWSYDAPWV KHPDVRGDPV ADLDMIDRLL AGRFDAAVIF TVYSQNPLPA AMMCWLAGIP
LRLAHCRENP YELLTDRVPE TEPESHVRHE VARQLALVRA IGAKTSDWRM AFEPGDAARR
AVHARLQAAL QRIGGAREPG ATRARWLVVH PGATAASRRW PAERFGEAAA AVAPLFDGIA
VTGSADERAL VDAVCERAGP RAVPLAGVLP LGELGALVET ADLLLSNNSG PVHLAAALGT
PVVDLYALTN PQHTPWRVPH RVLNVDVPCR NCYRSVCNQP GHPCLRGVSV DDVAAAVHAL
LRGRARHAQR AAEWAAAHDE GEPVAAHASN VIPFAHVITR N