| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6420 |
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| Symbol | |
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| ID | 4454136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 631231 |
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| End bp | 632793 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639698483 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_840043 |
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| Protein GI | 116686796 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.111897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATT CTCTTCCTCG CAACATGTCG CTGACCGCCT TCGATCCGCA TCGCACAGCA
TTCGAGTGCA AGCACGAGGT TGACGCGGTT CCTCCGCTGG ATCCGGAGGC CGATCGCTGG
AATCAGCAGG CAATGGCGCT GACCAGTTCG CTGTTGTGGC CGAACCAGCG CGATTACAAG
GGGGCTGTCG ATTTGTGGAC GAAGGCGGCC GAGCGTAAGC ACTGGAAAGC CATGCTGAAT
CTGGCGAATG CCTACGCTCA GGGGCAAGGT GTGGAACGTG ATTCGGAACA TGCCGTTCAG
ATCACCGAAC AGGCGATGAA ACTGGGTATT CCGGCAGCCT ACGATTTGAT GGGCACGTAC
CACATGAACG GGATGGGGGT TAAGCAGGAT GCGAGCCGCG CCTATGCGTT CTGGCAACTG
GCCGCCGATA TGGGTAGTCC AAGTGCGATG GCGTATCTGG GTGGCAAGAT GGATGCGCTC
TATGACGACC CGAAGGCAGG CTTCTGGGGT AACCGAAAGA TCGCGCTCAA GATGCTTGAA
TGTGCGGTCG CGCAGGGCAA CGGACTTGCT GCATATGAGT TGGGAACGAC GATTGTGGGA
GATCGAGCCG AGTTGAGCGA GAACAACGAA CGCGCACTCA AGACCCTGCA TGCGGGCGTG
AAATTCGGCA GCGCCGAGAG CGCGGGGTGG TTGAGTGCGT CGTTTGGCAA GGGGGACGCC
CTGGTCGGCC ATGTCAAGGA TGAAGCCCGC GCCGAACGCT ACAGCGTCCT TGCCGACCGC
CTCGAGCGCG ACCCCGACCT GCGTCTGCCG AATCTGGACA AGGTCGTGCC GCTGCCGCCC
GCCAAGTTGC CCAAGTGGGA CGGCAACAAG GAGACGTTGA TCGACGCGGC GAAAGCGGTG
ACGTCCGTGC CGGCGTCGCC GGTCAAACCT GCGGCGCACC CCGTGTCGCT GCGTACGGGG
CGCGCGCACG TGCCCGATGG CTACATGCTG CCGGAGAAGC CGCAGGTTGC CGTTCCTCCG
CAGGCGGAAA CGACGGCTGC TCCTGTCGGT GGTTACTGGC TCGCCCAGCT GAAGTATCCG
AGCGCCGAAC GTCACTTCGC ATGGAATGCG GCTCAGGTAC CGATGCATTA CCGGAATGAT
GAACTGTTCG ATCGGAGTCG CCCCGGCCTG ATGCCTGAGG ACGGTCGCAT CTTCTTCCAC
TATGTCGGCG ATGCGATTCC GATGCCCGTG CAATCGGCGG AATCGCATCC GCGTGTGACA
CAGGGCATTG CGCGCGCCGC CGAATTTCCC GACCCGGCTA TCCGGTGTCG CGGCATCCGC
GCGTGCCCGG TGACCGGTAT TTGGCAGGCT GTGGTGGCGG ACGATCATCC TCGGGCGACC
ACGTTCAATC AGTGGTATCG CCAGGCCTAC GTGTTGCAGG GTGACGCGTT TCCCGATCCA
CGGGTCATGC ATCTGGACGT ATCGCCGGCG GACGTGACGT GGACGTGGTG GAACGAAGCT
AATCACCTTG GATTTGCGAA GCTGCCTCAG GTCAGCCTCG GCAACCCTTC CGAGAACGCT
TGA
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| Protein sequence | MNDSLPRNMS LTAFDPHRTA FECKHEVDAV PPLDPEADRW NQQAMALTSS LLWPNQRDYK
GAVDLWTKAA ERKHWKAMLN LANAYAQGQG VERDSEHAVQ ITEQAMKLGI PAAYDLMGTY
HMNGMGVKQD ASRAYAFWQL AADMGSPSAM AYLGGKMDAL YDDPKAGFWG NRKIALKMLE
CAVAQGNGLA AYELGTTIVG DRAELSENNE RALKTLHAGV KFGSAESAGW LSASFGKGDA
LVGHVKDEAR AERYSVLADR LERDPDLRLP NLDKVVPLPP AKLPKWDGNK ETLIDAAKAV
TSVPASPVKP AAHPVSLRTG RAHVPDGYML PEKPQVAVPP QAETTAAPVG GYWLAQLKYP
SAERHFAWNA AQVPMHYRND ELFDRSRPGL MPEDGRIFFH YVGDAIPMPV QSAESHPRVT
QGIARAAEFP DPAIRCRGIR ACPVTGIWQA VVADDHPRAT TFNQWYRQAY VLQGDAFPDP
RVMHLDVSPA DVTWTWWNEA NHLGFAKLPQ VSLGNPSENA
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