Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6418 |
Symbol | |
ID | 4454134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 626134 |
End bp | 629004 |
Gene Length | 2871 bp |
Protein Length | 956 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639698481 |
Product | Rhs element Vgr protein |
Protein accession | YP_840041 |
Protein GI | 116686794 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.149183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCG CCTTCGTTGG CGCGCTCGAT CAGAACAATC GTGCGATCCG GTTTCATTGG GGCCGTCATC AGGATGCGCT GGCGCATGTC CTGGTGCCAC AGAGCATCGA TTTGACGGAA GGTCTCTGTG TCGGCATCGA AGGGCACCTG ACCTGCCTGT CGTCACGCCC GGATCTGCCG CTCTCCGCCT TTCTGGGGTT GCCGCTTTCG GTGCAACTGA TGACGGATCG AGGCAAGCCA TATCCGATCA ATGGGATCAT CACAGATGTC CGCGCCGGTC AATCGGACGG CTCCCTCACG TGCGTACAAC TGACATTGAG AGATGCGCTG AGTATTCTCG ATCAGCGGAT CAACAGCAGA ACGTTCCGTT CGATGAGTGT TCCGGACATT CTGGAGACAC TGCTGCACGA ATGGCAGCAA CGCAGTTCCG CGTTGGCGCA GGCTTTCGAT TTCGAGCTCG TGCTGGATCG CAACCAGTAT CCAAAGCGCG AGCAGACGCG CCAGGCGGGT GAATCGGATG CGGCCTTCAT TCGACGGATG TGTCGACGCG ACGGTATTTT CTGGTACACC CGGGCTGGCA AGCATGATGG TGCGGCCGCC GACACGCCGG TCCATACGCT CGTGTTCTGC GACGATCCGA CGAAGCTGCC ACAGGCGGCG GCAGGCCATG TGCCTTACCA CCGGGGTACG CAGTCGCGGG AGCGTGACTC GGTCACGCTA TGGTCCGCGG CCCGTGCGTT GACGCCCGGA AGTGTGCGGC GTGCCAGTTG GGATTACAAG ACCGGCAGGA TCGCGCAGTC TGAGCAGGAG ACGATCGTCG ATCAGGGCGA GGCGGGCAAC GATCTTGCGA AGCTGCTGGC CGACTCGGTC ATCGACGTTC CGCATGCGGC GGACTCGGAT GCCGACCACG AGCGTTTGGC GAAGGCTCGG ATTCTGGCAC ATGAGCATCG CGCCGAATGC GTGCATGCGT CGAGCGATGT CCGGGATGTC TCGCCGGGCT TCTGGTTCAC GCTGGCTGGG CATCCGGAGG TCGATACCCG GCCCGAGGAG CAGCGGCAGT TCGTCGTTAC CAGCTTGCAC CACCGGGCGA CCAACAATTT TTCGAAGGCG CTCGACGAGC GGGCCCAAGT GCTGTTTGCC GCGAGTCGCT GGAGTTTCGA CGCGTTGCCG GTCGAAGAGG GGGCCGGGGT TCGCTACGAG AACACATTCG TTTGCGTGCG CCGCGGTGTG CCGCTGACAC CTGCCTACGA TCCGCGCGTC GATTTGCCGC CCGTGCATCC GTTTACCGCG AAAGTGGTTG GCCAGGACGG CGAGGAAGTG CACTGCGACG AATTGGGGCG CATCAAGGTG CAGATTCTTG GTCTGCGCGC CGACGATCAT GCCCATGCGC AAGGTGCCGG CACCAGCGGA ACCGAGCGGG ACAGCGCGTG GGTGAGATGG GTCAGCCCCT GGGCCGGGCC GAACTACGGC ATGGACATGC TGCCGCGCGC GGGAATGGAA GTGCTGATCG ACCATTTACA CGGTGACCCC GACAAGATGG TCGTGATCGG GGTGCTGCAC GGTGGTCCCA ACATGCCGAC CACGTTCAGC CATACCGGCT CGCTTCCGGG CAATCGATAT CTTTCCGGCA TCAAGACCAA GGAGGTCAAG GCGGATCGCT ACAACCAGTT GCGTTTCGAC GATACACCCG GCCAGATCAG TAGCCAGCTT GCCAGCGAAC ACACCTATAC CCAGCTGAAC CTGGGCTACC TGACGGAACC TCGTAACGAT GGCAAGGGCG CGCCTCGTGG CGACGGTTTG GAGGCCAGAA CCGATGCCCA GGCGGTCATT CGCGCCGCGA AGGGCGTCTA CGTGACCGCG CAGCAGCAGG GGCGTGCCGA AGGCAAGATG CTCGAACGCA CGGCGTTGCA GACGTTGATC GAACAATTGC AGGAACTGGT ACGAAACCTC GGTGATGCGT CCGCCGCGAA CGACGCCGAC AACACCGACC TCGCACGCAT CGAGAAGATC ACATCGCAGA TCAAGGGCTG GGATGCTGGC AGCAACGTTG ATCAGGGTGG CGGCGGCTCC GGCGGTGCGC CGATGGTGGC AATCGAGGGG CCGGCCGGCG TGACCGTGGT TAGCCAGGAC GCGATGGTGC TCGGGGCACA GACCAACATC GATGCGGTGA GTGCCGGCAA CACGCAGATC AGCGTGGGAC GTCGTCTGTT GATGCGCGTC GGCGATTGGA TGAGTGCTTT CGCGGCCAAG GGCATGACGC TGGTGACGGC AGACGGGAAG CTGCGTATCG AGGCGCACAA GGAGGACGTG GTTGTGAAGG CCGCCAAGCG CATCATCCTG GAGGCAGGCG AAGAGATCGT GTTCCGCTCG CCGAAGGTCA ATACGCAGGC GAGCGACGAA GCGTCGATCA ACGGCGGGTC GAGCTACAGC CAGTGGAATG GCGGCGGCGT CGTGCATGGC ACGAGCGGCG TATGGCGCGA ACACGCGGCG TCGCACAGTC TCGTCGGGCC GGACAACAAG CCTGTGAAAG CGCCCGACCC CCTGACGTTC AAGGAGCTGG AGCAACAAGA CAGCTTCGCG GTGGTGCTCC GTTCCCATCC CAGCGACGGG CGGCCGCTTG CTTACGAGCC GTACACCCTT TACAAGGGAG CGGCCAAGAT TGCGGACGGC GTGACCGACG AGCATGGTCA ACTGATCATT GCGAATCACC AGAAGGGCAC GTCTTCCTAT ACGGTCAAGC TGCACAACGG GCACGAGATC GAGGTGCCCG TGATGGAGGG AGGGTTGAGC GACGATGATC AACTGGCCGC GCAGGGATGG CGGGCAGTCG ACGGCGATCC GGAATCGCGC CAGCGCCACG CACAGGGCTG A
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Protein sequence | MLRAFVGALD QNNRAIRFHW GRHQDALAHV LVPQSIDLTE GLCVGIEGHL TCLSSRPDLP LSAFLGLPLS VQLMTDRGKP YPINGIITDV RAGQSDGSLT CVQLTLRDAL SILDQRINSR TFRSMSVPDI LETLLHEWQQ RSSALAQAFD FELVLDRNQY PKREQTRQAG ESDAAFIRRM CRRDGIFWYT RAGKHDGAAA DTPVHTLVFC DDPTKLPQAA AGHVPYHRGT QSRERDSVTL WSAARALTPG SVRRASWDYK TGRIAQSEQE TIVDQGEAGN DLAKLLADSV IDVPHAADSD ADHERLAKAR ILAHEHRAEC VHASSDVRDV SPGFWFTLAG HPEVDTRPEE QRQFVVTSLH HRATNNFSKA LDERAQVLFA ASRWSFDALP VEEGAGVRYE NTFVCVRRGV PLTPAYDPRV DLPPVHPFTA KVVGQDGEEV HCDELGRIKV QILGLRADDH AHAQGAGTSG TERDSAWVRW VSPWAGPNYG MDMLPRAGME VLIDHLHGDP DKMVVIGVLH GGPNMPTTFS HTGSLPGNRY LSGIKTKEVK ADRYNQLRFD DTPGQISSQL ASEHTYTQLN LGYLTEPRND GKGAPRGDGL EARTDAQAVI RAAKGVYVTA QQQGRAEGKM LERTALQTLI EQLQELVRNL GDASAANDAD NTDLARIEKI TSQIKGWDAG SNVDQGGGGS GGAPMVAIEG PAGVTVVSQD AMVLGAQTNI DAVSAGNTQI SVGRRLLMRV GDWMSAFAAK GMTLVTADGK LRIEAHKEDV VVKAAKRIIL EAGEEIVFRS PKVNTQASDE ASINGGSSYS QWNGGGVVHG TSGVWREHAA SHSLVGPDNK PVKAPDPLTF KELEQQDSFA VVLRSHPSDG RPLAYEPYTL YKGAAKIADG VTDEHGQLII ANHQKGTSSY TVKLHNGHEI EVPVMEGGLS DDDQLAAQGW RAVDGDPESR QRHAQG
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