Gene Bcen2424_6399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6399 
Symbol 
ID4454046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp599717 
End bp601063 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content68% 
IMG OID639698462 
Producthypothetical protein 
Protein accessionYP_840022 
Protein GI116686775 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0160] 4-aminobutyrate aminotransferase and related aminotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.755332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA GTATTCACGG CGAGTCGAAT CCCGCGCTCG CGTCGTCGTT TCGAAAGGTG 
CTCGTGCCCT GGGCGGTCCA GGGCGGGCTC AATCCGCCGG TCATCACGCA TGCGCAGGGA
TGCTACTTCT ACGATGCGAA CGGCAAGCGC TACCTGGACC TCACCAGCGG CTATGTCGCG
GTGTCGTTGG GACATGGCCA TCCGAAGGTG GTCGAGGCGA TCCAGGCGCA GGCCGCGCGC
ATGTGCTGGG TCGCGTCCAG CTACTTCAAC GACGTGCGCG CCGAATACGC GGAACTCCTG
AACAGCGTTT CGCCGTGGCC GGACGGGCTG CGCGTGCATT TCACCTGCGG CGGTGCCGAG
GCGAACGACG ACGCGGTGAA GATCGCGCGG CTGGTGACAC GCCGGCCCAA GGTGCTGACC
GCCTATCGGT CGTATCACGG CAGCACGCTC GGCGCGAGCG CGATGACGGG CGTGGACCGC
TGGCGCGATC CGTTCCCGGC GCTGCCGGGC ATGGTGAAGT TCTTTGCGCC GTATCCGTAT
CGCAGCCCGT TCCATACGTC GGAGCCGGCC GAGGAAACCC GGCGCGCCCT CGATCACCTG
GCGCGTGTCC TTTCGCATGA AGGCGCCCAA AACGTCGCCG CGATCCTGAT GGAGCCGATG
ACCGGCTCCA GCGGGGTCGT CGTCTACCCG CCGGGCTATC TCGCGGGCGT TCGGGATCTG
TGCGACCGGC ACGGCATCCT GCTGATCTTC GACGAGGTCA TGACGGGCTT CGGGCGCACG
GGGGCATTGT TCTGCGCCGA GCGGGTCGGC GTGTTGCCGG ACCTGATTTC GTTCGCCAAG
GGGGCCAGCT CTTCGTATAC GCCCCTTGGC GGCGTCCTGG TGCGCGAAGG TGTGGCCCGC
CACTTCGATA CGGAACTCTT CGACGTAGGC CACACGCATG CGGGCCACGT ACTGGCGGTC
GCCGGCGGGC TCGCCGCGCT GAAGGTCTAT CTGGAAGAGG GCTTGTTCGA GCGGGCGCGC
GAGATCGAAG GCTGGCTGCG CGACGGTCTC GGCGAGCTGG CGGAGCGTCA TCCGTCGATC
GGCGACGTGC GGGGCATGGG CGCCCAGTTC GGCATCGAGC TGGTGCGCGA CCGGGAAACG
CGCGAGCCGC TCGTCGAGTG GCACCACCCG GCGGGATCGG CGCCGATGCG CGCGTTCTAT
GGCGAACTGC TGAAGCGCGG CGTTCACGCG TACGGGCGCT ACAACGTGGT GATCGTGACG
CCGCCGCTCG TCATCTCGCG CACGGAGCTG GACGAGGGAC TGGATGCGCT CGACGCGGCG
CTGACGGTGC TGGAGGCCGC GCGATGA
 
Protein sequence
MDLSIHGESN PALASSFRKV LVPWAVQGGL NPPVITHAQG CYFYDANGKR YLDLTSGYVA 
VSLGHGHPKV VEAIQAQAAR MCWVASSYFN DVRAEYAELL NSVSPWPDGL RVHFTCGGAE
ANDDAVKIAR LVTRRPKVLT AYRSYHGSTL GASAMTGVDR WRDPFPALPG MVKFFAPYPY
RSPFHTSEPA EETRRALDHL ARVLSHEGAQ NVAAILMEPM TGSSGVVVYP PGYLAGVRDL
CDRHGILLIF DEVMTGFGRT GALFCAERVG VLPDLISFAK GASSSYTPLG GVLVREGVAR
HFDTELFDVG HTHAGHVLAV AGGLAALKVY LEEGLFERAR EIEGWLRDGL GELAERHPSI
GDVRGMGAQF GIELVRDRET REPLVEWHHP AGSAPMRAFY GELLKRGVHA YGRYNVVIVT
PPLVISRTEL DEGLDALDAA LTVLEAAR