Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6398 |
Symbol | |
ID | 4454045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 598671 |
End bp | 599591 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698461 |
Product | LysR family transcriptional regulator |
Protein accession | YP_840021 |
Protein GI | 116686774 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.737732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCGAC AACTTCCACC GCTGCTCTCC GTCCGCGCAT TCGAGGCGGC CGCGCGCCAT GGCGGCTTCG CCCGGGCAGG TGACGAGCTG TGCGTCACGT CCGGTGCGGT GGGCCATCAG GTGCGGCTGC TGGAGGAGTG GCTGGGCACG CCGTTGTTCA TGCGTGGCGC CCGGTCGGTC CAGTTGACGG AGATCGGGCG GCGCTACTTC CTGGAAATCG AACGCTTGAT GGACGAGCTC GAGCGCGCGT CGCTCGACAT CCGGCAAGCC GCGGATTCGC CGGAGGTCAC GGTCACCGCG ATGCCGTCGT TCGTCACGCG TTGGCTGATG CCGCGCCTGG GCGAGTTCCG GCGGCTGCAT CCCGACATCG AGGTGCGCCT GCTGGCTTCG GTGCCCGCCG TCGACTTCAG CCGCGAGCGC GTCGACGTGG CGATCCGCCT GGGTGTGGGC CCCTATCCGG GGCTCATCGC GGAAAAACTG ATGTCGGAGA CGTTCCTCGC GGTCGGGCAA CCGTCGATAT GCAAGCCGTT GCGCACCGTG GACGATCTGT TGCGTGCAAC GCTGTTGCAC GACGAATACG AGGCTCGCAT TCCGGAGCAG GTGGACTGGA TGCGCTGGAG CCGGATGCAG GACGTGCAGG CCGGCCCGGC GCGTTTGCGG CAAGGGCCGA GCTTCTCGCA TACCTATCTG ACGCTCGATG CCGCGATAGC GGGCCAGGGC GTGGCCGTGG CGTCGGACGT CCTCGCCGCC GATGCGGTCA GGCAAGGGCT GCTGGCCATT GCGCCGGGCA AGCCGGTGCA AGGCCCCTAC AGCTACCATC TGTTGACGAC GCGCGCGGCC GCCGCGCGGC CGCAAATCGA TGCGTTCTGC AGTTGGCTGC GATCGGCCGC ACGGTCGTTT TCGGCGGCCG GCTGGGCTTG A
|
Protein sequence | MSRQLPPLLS VRAFEAAARH GGFARAGDEL CVTSGAVGHQ VRLLEEWLGT PLFMRGARSV QLTEIGRRYF LEIERLMDEL ERASLDIRQA ADSPEVTVTA MPSFVTRWLM PRLGEFRRLH PDIEVRLLAS VPAVDFSRER VDVAIRLGVG PYPGLIAEKL MSETFLAVGQ PSICKPLRTV DDLLRATLLH DEYEARIPEQ VDWMRWSRMQ DVQAGPARLR QGPSFSHTYL TLDAAIAGQG VAVASDVLAA DAVRQGLLAI APGKPVQGPY SYHLLTTRAA AARPQIDAFC SWLRSAARSF SAAGWA
|
| |