| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6379 |
|---|
| Symbol | |
|---|
| ID | 4453871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 577213 |
|---|
| End bp | 578133 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639698444 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_840004 |
|---|
| Protein GI | 116686757 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCCA AACCGCTTCC CCCCGTCTAT GCGCTCCGCG CGTTCGAGAG CGCCGCGCGC
AACGGCTCGT TCACGCTGGC CGCCGAGGAA CTGAGCCTGA CGCAAAGCGC GGTCAGCAAG
CACGTGAAGA CACTGGAGGC CTACTTCGGC CGGAAGCTGT TCGTCCGGCA CGGGCCAAAA
ATGACCGTGA CGGCGGAAGC CCACATCTTC GCGGCCGGCC TCAGGCGCGG GTTCCGGCAG
GTCGAGGAAG CGTGCATGCT GTTCCGCACG CAACGCGACG TGCTGCGGCT CAAGGCGCCG
TCCACGCTGA CGATGCGCTG GCTGCTCGAC GCACTGGCCG CCTTTCGCGG CACACGGCCG
GCGTTCGAGG TGCAGATCGC GAGCGTGTGG ATGGATGTCG ACACCGTCGA TTTTTTCAGC
GAATCCTACG ATTGCGCGAT CCTGCTCGGT GCAGGCAAGT TCGGCGAAAG CACGCATTGC
GTGAAGCTGT TCGACGAATG GCTGATTCCG GTGTGCTCGC GGGCCACCGC CGCGGTCGCG
CGCGCGAATC CCGCCGCGTG CGAGCTGATC CATCCGTCGC CCGACCGGCG CGACTGGCGC
CGCTGGCTCA ACGGCAGCGG TCACGACCTG AATGTGGACA TCACGCGCGG GCAGGTGTTC
GACATGCTCG AACAGGGCAT CGCGGCGGCC ATCGCCGGTC ACGGGATGTC GATCGGCGAC
CTCGCGCTGT GCGCGACGGC GATCGACGAG AAGCAGCTCG TGCTGCCGTT CAAGACAGCC
GTGAGCACCG GCGATGCGTA CTACCTCGTA TGGCCGGAAG ATTCCGCCAA GGCCGCGCAG
GTACGCGAGT TGCATGCGTT CCTGGCCGGC CGGATGCCGC GTCTCGCGCA TCCGGGCGTT
CGCTTCGTCG ATTTGGGGTG A
|
|---|
| Protein sequence | MKAKPLPPVY ALRAFESAAR NGSFTLAAEE LSLTQSAVSK HVKTLEAYFG RKLFVRHGPK
MTVTAEAHIF AAGLRRGFRQ VEEACMLFRT QRDVLRLKAP STLTMRWLLD ALAAFRGTRP
AFEVQIASVW MDVDTVDFFS ESYDCAILLG AGKFGESTHC VKLFDEWLIP VCSRATAAVA
RANPAACELI HPSPDRRDWR RWLNGSGHDL NVDITRGQVF DMLEQGIAAA IAGHGMSIGD
LALCATAIDE KQLVLPFKTA VSTGDAYYLV WPEDSAKAAQ VRELHAFLAG RMPRLAHPGV
RFVDLG
|
|---|
| |