Gene Bcen2424_6350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6350 
Symbol 
ID4454722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp540377 
End bp543298 
Gene Length2922 bp 
Protein Length973 aa 
Translation table11 
GC content73% 
IMG OID639698415 
Producttranscriptional regulator 
Protein accessionYP_839975 
Protein GI116686728 
COG category[R] General function prediction only 
COG ID[COG3903] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00620791 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGA TCGGAACTTT GTCGGTGGAC TTCGAGCAAC GCGACATTCG CCGCCACGGC 
GCGTCGCTGC GCATCGGCGC GCGCGCGCTC GACATTCTCG AAGTCCTGCA CCGCGCGAGC
GGTTCGGTCG TGTCGAAAGA CGACATCATG GACGCGGTCT GGCCGGGCCT GATCGTCGAG
GAAAACCGGC TTCAGGTGCA TGTGGCCACG CTGCGCAAGG CGCTCGGCGC GAGCCGCGAC
CTGATCAAGA CGGTGCCCGG GCGCGGCTAC CTGCTGGTCG CGAGCGCGTC GCCCGGACCG
GATCTCGTGC CCGCGGCCGA AGCGCCGGCC GTCGCCGTAC CGCCGGCCGT CGCGGCGCTG
CCGGATGCCT GCACGTCGTC GCTGCTCGCG CCGCTGGTCG GGCGCGACGC CGAAATCGCG
CAGATCGTCG ACATGCTGGA ACGCACGCCG GTCATCACGC TCGTCGGCGC GGGCGGCATC
GGCAAGACGA GTCTTGCGGT GCGCGTCGCG CACGGCATGC GCAGCCGCGC GCACGAGCGC
GTGCTGTTCG TGGAACTGGC GCGCGCGTCG ACGCGCGACG ACATGCTGAT CGCGCTCGCC
GCGGAGCTCG GCCTCGATAC GCCCGGCGTG CCCGCCATCG ACCGCATCGG CGACGCGTTC
GCGACGTCGC GCTGCCTGCT GGTACTCGAC AACGCGGAGC ACATCGTCGA TCTGGTGGCG
AGCCTCGTCG AAACGCTGAC GTCGAGCGCC GGCTCGCTGC GCGTGCTCGT GACGAGCCGC
GAGCCGCTGC ACATCTCGGC CGAAGCGGTG CTGCGCATGA GCCCGCTCGC GGTGCCGGAC
GGTAACGCGT CCGCCGCGGA AATCGTCCGT TGTTCGGCCG TCGAGCTGTT CCTGGAACGC
GTGCGCGCGG CCGCGCCGGA TTGCGCGGTC GACGAAGCCG GCGTGCGGCT GATCGGCGAC
ATCTGCCGGC GCCTCGACGG GCTGCCGCTC GCGATCGAAC TGGCCGCGGC GCGCGTGGCG
ACGCTCGGGC TCGCGGTCGT CGCGTCGCGC CTCGACGACC GGCTGAACCT GCTGACGGGC
GGGCTGCGCT CGGCGCTGCC GCGTCATCAG ACGCTGCGCG CGACGTTCGA TTGGAGCTAC
GTGCTGCTCG ACCGGGCCGC GCGCGCGCTG TTTCGCCGGA TGGGGTGCTT CATCGGGCCG
TTTTCGTTCG ATGCCGCGCG CGCGGTCGCG ACCGAGCCCG GCACCTCGGC CGCGGACATG
ATCGCGGTGC TCGGCGAGCT GGTGGCGAAA TCGCTGGTGA CCGTCGAGTT CGATGGCGCG
TATGCGCGCT ACCGGCTGAC CGAATCGACG CGCGCGTACG CGCTGGAAAA ACTGCACAAC
GAGGGCGAGT TCGAGCGCAT CGTCGCGCGC CATGCGGCGT ACGAGCGCGA GCGGGCGGGC
GCACCTCCCG CGGCGCCCGT GCTGCTCGCC GACGTGCCGC CTGCCGATGC GCCCGCGCCG
GCCGTGGATG AACCGGTGGA CGCCGCCGAA GCCGGAGGCG TGCCCGAGCC CGACCGGCTG
GCGCGCGCGC TGCTGGAGCC GTCGCGGATG CGCGCATGCA CGGCGCGTGC GCGCCAGGTA
CTCGACGGGC TGGACACGGA CGCCACGGGC CCGGTCGATG CCGCGCGCGA GATGCGGCTG
CGGGCGGCCT GCGCGTCGGC GCTGCTGCAT ACCGACGGCG ACGCGCTGGC CGCCGCCGCG
ATGTGGGACC GCACGCTCGG TCTCGCCGCG CACATCGGCG ACGATGCGTT CGACGCGCGC
GCGCTGGTCG GGCTGTGGAA CACGATGCTG ACGCTGTCGG ACATTCACGA GTCGCTGCGC
TACGCGACGC GCTTCGAGCG GGCGGCCGAG CGGCGCGGCG ACCGGTCGCA GCGGTTGCTG
GCCAACACGA TGGTCGCGAC GTCGCTGCAT TACTTCGGCG AGCATGCGCA GGCGCGCGAG
CGGCTGGAAG CGGCGACGGC CGAGCTGGCC GACGCGGGCG AACCGCCGTG CGCGCAGGCC
GCGCTGGGCG TCGACATGGC GACGCTGGGG CGCACGATGC TGATCCGCCT GCTCTGGATG
CAGGGCGAGC CCGAGCACGC GATGCGCGTC GCCGCGCAAG CGGTCGAGCA TGCGCGCCGC
GACCCGTCGC CCCTCCCGCT GTGCGTCGTG CTCGGCGCGG CCGCCGTGCC GATCGCGCTG
CGCTACGGCG ATCACGACAT CACCTCCGAC TATCTCGCGA CGCTGCGCGC GACCGCCGAC
GCACACGGTT TCGACATCTG GCGCAGTCAC GCGGAATGCC TGACCGGCCA GTTCGACATC
CAGGCCGGCC ATCCCGGCGC GGGCCTCGCC CGGCTCGAGC CCGCATTGCG GCGCGTCGAG
GCGAGCGGCT TCCGGCGCGT GCTCGCGCCG TTGACCGTCG CATACGCGGA GGGCCTCGTG
CGGACGGGCC GCGCCGATGA AGCGTGCACC CGGCTCGATG CGACGCTCGC ACGCTGCCGT
GCGCACGGCG AGCACCTGTT CGTCCCCGAA CTGCTGCGCG TGAGAGGCGT CGCGATGCTG
GAACAGGCGC GCATCGTCGG CGCGGATCTC GCCGCCGCGT ACGAAGCCGA CGGGCATCGC
CATCTGCAGA TGGCGATCCA GACCGCGAAC GCGCAGGGCG CCGCGATGTG GGCGCTGCGC
AGCTCGCTCG ATCTCGCCGA TCACCTGATC GAGCGCGGGC ACACCGCGCA GGCGTCGGCG
CTGGTCGCCG GCGTCGCGCG GCACTTCGAT CCGCATTCGC GCGCCCACGA CGTGCGCCGT
TTGCTGCGCG TGCAGAATTT CGTGCGTCAG GGTGCGCCGC TCGCGCCGTG CCTGACGCGC
GCGCGACGCG ACACCGCCGA CGCGGCGCAG CAGGCGGCAT GA
 
Protein sequence
MIQIGTLSVD FEQRDIRRHG ASLRIGARAL DILEVLHRAS GSVVSKDDIM DAVWPGLIVE 
ENRLQVHVAT LRKALGASRD LIKTVPGRGY LLVASASPGP DLVPAAEAPA VAVPPAVAAL
PDACTSSLLA PLVGRDAEIA QIVDMLERTP VITLVGAGGI GKTSLAVRVA HGMRSRAHER
VLFVELARAS TRDDMLIALA AELGLDTPGV PAIDRIGDAF ATSRCLLVLD NAEHIVDLVA
SLVETLTSSA GSLRVLVTSR EPLHISAEAV LRMSPLAVPD GNASAAEIVR CSAVELFLER
VRAAAPDCAV DEAGVRLIGD ICRRLDGLPL AIELAAARVA TLGLAVVASR LDDRLNLLTG
GLRSALPRHQ TLRATFDWSY VLLDRAARAL FRRMGCFIGP FSFDAARAVA TEPGTSAADM
IAVLGELVAK SLVTVEFDGA YARYRLTEST RAYALEKLHN EGEFERIVAR HAAYERERAG
APPAAPVLLA DVPPADAPAP AVDEPVDAAE AGGVPEPDRL ARALLEPSRM RACTARARQV
LDGLDTDATG PVDAAREMRL RAACASALLH TDGDALAAAA MWDRTLGLAA HIGDDAFDAR
ALVGLWNTML TLSDIHESLR YATRFERAAE RRGDRSQRLL ANTMVATSLH YFGEHAQARE
RLEAATAELA DAGEPPCAQA ALGVDMATLG RTMLIRLLWM QGEPEHAMRV AAQAVEHARR
DPSPLPLCVV LGAAAVPIAL RYGDHDITSD YLATLRATAD AHGFDIWRSH AECLTGQFDI
QAGHPGAGLA RLEPALRRVE ASGFRRVLAP LTVAYAEGLV RTGRADEACT RLDATLARCR
AHGEHLFVPE LLRVRGVAML EQARIVGADL AAAYEADGHR HLQMAIQTAN AQGAAMWALR
SSLDLADHLI ERGHTAQASA LVAGVARHFD PHSRAHDVRR LLRVQNFVRQ GAPLAPCLTR
ARRDTADAAQ QAA