| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6350 |
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| Symbol | |
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| ID | 4454722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 540377 |
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| End bp | 543298 |
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| Gene Length | 2922 bp |
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| Protein Length | 973 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639698415 |
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| Product | transcriptional regulator |
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| Protein accession | YP_839975 |
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| Protein GI | 116686728 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00620791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGA TCGGAACTTT GTCGGTGGAC TTCGAGCAAC GCGACATTCG CCGCCACGGC
GCGTCGCTGC GCATCGGCGC GCGCGCGCTC GACATTCTCG AAGTCCTGCA CCGCGCGAGC
GGTTCGGTCG TGTCGAAAGA CGACATCATG GACGCGGTCT GGCCGGGCCT GATCGTCGAG
GAAAACCGGC TTCAGGTGCA TGTGGCCACG CTGCGCAAGG CGCTCGGCGC GAGCCGCGAC
CTGATCAAGA CGGTGCCCGG GCGCGGCTAC CTGCTGGTCG CGAGCGCGTC GCCCGGACCG
GATCTCGTGC CCGCGGCCGA AGCGCCGGCC GTCGCCGTAC CGCCGGCCGT CGCGGCGCTG
CCGGATGCCT GCACGTCGTC GCTGCTCGCG CCGCTGGTCG GGCGCGACGC CGAAATCGCG
CAGATCGTCG ACATGCTGGA ACGCACGCCG GTCATCACGC TCGTCGGCGC GGGCGGCATC
GGCAAGACGA GTCTTGCGGT GCGCGTCGCG CACGGCATGC GCAGCCGCGC GCACGAGCGC
GTGCTGTTCG TGGAACTGGC GCGCGCGTCG ACGCGCGACG ACATGCTGAT CGCGCTCGCC
GCGGAGCTCG GCCTCGATAC GCCCGGCGTG CCCGCCATCG ACCGCATCGG CGACGCGTTC
GCGACGTCGC GCTGCCTGCT GGTACTCGAC AACGCGGAGC ACATCGTCGA TCTGGTGGCG
AGCCTCGTCG AAACGCTGAC GTCGAGCGCC GGCTCGCTGC GCGTGCTCGT GACGAGCCGC
GAGCCGCTGC ACATCTCGGC CGAAGCGGTG CTGCGCATGA GCCCGCTCGC GGTGCCGGAC
GGTAACGCGT CCGCCGCGGA AATCGTCCGT TGTTCGGCCG TCGAGCTGTT CCTGGAACGC
GTGCGCGCGG CCGCGCCGGA TTGCGCGGTC GACGAAGCCG GCGTGCGGCT GATCGGCGAC
ATCTGCCGGC GCCTCGACGG GCTGCCGCTC GCGATCGAAC TGGCCGCGGC GCGCGTGGCG
ACGCTCGGGC TCGCGGTCGT CGCGTCGCGC CTCGACGACC GGCTGAACCT GCTGACGGGC
GGGCTGCGCT CGGCGCTGCC GCGTCATCAG ACGCTGCGCG CGACGTTCGA TTGGAGCTAC
GTGCTGCTCG ACCGGGCCGC GCGCGCGCTG TTTCGCCGGA TGGGGTGCTT CATCGGGCCG
TTTTCGTTCG ATGCCGCGCG CGCGGTCGCG ACCGAGCCCG GCACCTCGGC CGCGGACATG
ATCGCGGTGC TCGGCGAGCT GGTGGCGAAA TCGCTGGTGA CCGTCGAGTT CGATGGCGCG
TATGCGCGCT ACCGGCTGAC CGAATCGACG CGCGCGTACG CGCTGGAAAA ACTGCACAAC
GAGGGCGAGT TCGAGCGCAT CGTCGCGCGC CATGCGGCGT ACGAGCGCGA GCGGGCGGGC
GCACCTCCCG CGGCGCCCGT GCTGCTCGCC GACGTGCCGC CTGCCGATGC GCCCGCGCCG
GCCGTGGATG AACCGGTGGA CGCCGCCGAA GCCGGAGGCG TGCCCGAGCC CGACCGGCTG
GCGCGCGCGC TGCTGGAGCC GTCGCGGATG CGCGCATGCA CGGCGCGTGC GCGCCAGGTA
CTCGACGGGC TGGACACGGA CGCCACGGGC CCGGTCGATG CCGCGCGCGA GATGCGGCTG
CGGGCGGCCT GCGCGTCGGC GCTGCTGCAT ACCGACGGCG ACGCGCTGGC CGCCGCCGCG
ATGTGGGACC GCACGCTCGG TCTCGCCGCG CACATCGGCG ACGATGCGTT CGACGCGCGC
GCGCTGGTCG GGCTGTGGAA CACGATGCTG ACGCTGTCGG ACATTCACGA GTCGCTGCGC
TACGCGACGC GCTTCGAGCG GGCGGCCGAG CGGCGCGGCG ACCGGTCGCA GCGGTTGCTG
GCCAACACGA TGGTCGCGAC GTCGCTGCAT TACTTCGGCG AGCATGCGCA GGCGCGCGAG
CGGCTGGAAG CGGCGACGGC CGAGCTGGCC GACGCGGGCG AACCGCCGTG CGCGCAGGCC
GCGCTGGGCG TCGACATGGC GACGCTGGGG CGCACGATGC TGATCCGCCT GCTCTGGATG
CAGGGCGAGC CCGAGCACGC GATGCGCGTC GCCGCGCAAG CGGTCGAGCA TGCGCGCCGC
GACCCGTCGC CCCTCCCGCT GTGCGTCGTG CTCGGCGCGG CCGCCGTGCC GATCGCGCTG
CGCTACGGCG ATCACGACAT CACCTCCGAC TATCTCGCGA CGCTGCGCGC GACCGCCGAC
GCACACGGTT TCGACATCTG GCGCAGTCAC GCGGAATGCC TGACCGGCCA GTTCGACATC
CAGGCCGGCC ATCCCGGCGC GGGCCTCGCC CGGCTCGAGC CCGCATTGCG GCGCGTCGAG
GCGAGCGGCT TCCGGCGCGT GCTCGCGCCG TTGACCGTCG CATACGCGGA GGGCCTCGTG
CGGACGGGCC GCGCCGATGA AGCGTGCACC CGGCTCGATG CGACGCTCGC ACGCTGCCGT
GCGCACGGCG AGCACCTGTT CGTCCCCGAA CTGCTGCGCG TGAGAGGCGT CGCGATGCTG
GAACAGGCGC GCATCGTCGG CGCGGATCTC GCCGCCGCGT ACGAAGCCGA CGGGCATCGC
CATCTGCAGA TGGCGATCCA GACCGCGAAC GCGCAGGGCG CCGCGATGTG GGCGCTGCGC
AGCTCGCTCG ATCTCGCCGA TCACCTGATC GAGCGCGGGC ACACCGCGCA GGCGTCGGCG
CTGGTCGCCG GCGTCGCGCG GCACTTCGAT CCGCATTCGC GCGCCCACGA CGTGCGCCGT
TTGCTGCGCG TGCAGAATTT CGTGCGTCAG GGTGCGCCGC TCGCGCCGTG CCTGACGCGC
GCGCGACGCG ACACCGCCGA CGCGGCGCAG CAGGCGGCAT GA
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| Protein sequence | MIQIGTLSVD FEQRDIRRHG ASLRIGARAL DILEVLHRAS GSVVSKDDIM DAVWPGLIVE
ENRLQVHVAT LRKALGASRD LIKTVPGRGY LLVASASPGP DLVPAAEAPA VAVPPAVAAL
PDACTSSLLA PLVGRDAEIA QIVDMLERTP VITLVGAGGI GKTSLAVRVA HGMRSRAHER
VLFVELARAS TRDDMLIALA AELGLDTPGV PAIDRIGDAF ATSRCLLVLD NAEHIVDLVA
SLVETLTSSA GSLRVLVTSR EPLHISAEAV LRMSPLAVPD GNASAAEIVR CSAVELFLER
VRAAAPDCAV DEAGVRLIGD ICRRLDGLPL AIELAAARVA TLGLAVVASR LDDRLNLLTG
GLRSALPRHQ TLRATFDWSY VLLDRAARAL FRRMGCFIGP FSFDAARAVA TEPGTSAADM
IAVLGELVAK SLVTVEFDGA YARYRLTEST RAYALEKLHN EGEFERIVAR HAAYERERAG
APPAAPVLLA DVPPADAPAP AVDEPVDAAE AGGVPEPDRL ARALLEPSRM RACTARARQV
LDGLDTDATG PVDAAREMRL RAACASALLH TDGDALAAAA MWDRTLGLAA HIGDDAFDAR
ALVGLWNTML TLSDIHESLR YATRFERAAE RRGDRSQRLL ANTMVATSLH YFGEHAQARE
RLEAATAELA DAGEPPCAQA ALGVDMATLG RTMLIRLLWM QGEPEHAMRV AAQAVEHARR
DPSPLPLCVV LGAAAVPIAL RYGDHDITSD YLATLRATAD AHGFDIWRSH AECLTGQFDI
QAGHPGAGLA RLEPALRRVE ASGFRRVLAP LTVAYAEGLV RTGRADEACT RLDATLARCR
AHGEHLFVPE LLRVRGVAML EQARIVGADL AAAYEADGHR HLQMAIQTAN AQGAAMWALR
SSLDLADHLI ERGHTAQASA LVAGVARHFD PHSRAHDVRR LLRVQNFVRQ GAPLAPCLTR
ARRDTADAAQ QAA
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