Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6344 |
Symbol | |
ID | 4454201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 532340 |
End bp | 534229 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639698409 |
Product | amidohydrolase 3 |
Protein accession | YP_839969 |
Protein GI | 116686722 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.438218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCAA CCGTGACCCA ACCGGATCTG ATCCTGCATA ACGGACGATT CACGACGCTC GATCGCGCGA ACCCTGTCGC GACGGCGGTC GCGATTGCCG CCGGACGCTT CGTCGCCGTC GGCAGCGAAG CGGACGTGAT GCCGCTCGCG GGCCGCGCGA CGAAGGTGGT CGATCTCGGC GGCCGCGGCG TGCTGCCGGG TCTGATCGAC AACCACTGCC ACGTGATTCG TGGCGGACTG AACTACAACA TGGAACTGCG CTGGGACGGC GTGCCGTCGC TTGCGCTCGC GATGGAGATG CTCAAGCAGC AGGTCGCGAT CACGCCCGCG CCGCAGTGGG TGCGCGTGGT CGGCGGCTTC ACCGAACATC AGTTCGTGGA GAAACGGCTG CCGACGATCG AAGAACTGAA CGCAGTCGCG CCCGATACGC CGGTATTCAT CCTGCATCTG TACGATCGCG CGCTGCTGAA CGCGGCCGCG CTGCGGGTGG TCGGCTATAC GAAGGACACG CCAGAGCCGC CGGGCGGCAC GATCCTGCGC GATGCCGCGG GCAACCCGAC CGGCCTGCTG CTCGCGAACC CGAACGCGAC GATCCTTTAC GCGACGCTCG CGAAAGGCCC GAAGCTGCCG TTCGAGTATC AGTACAACTC GACGCGCCAC TTCATGCGCG AGCTGAACCG GCTCGGCGTG ACGGGCGTGA TCGACGCGGG CGGCGGTTCG CAGAATTATC CCGACGATTA CGAAGTGATC CGCAAGCTGC ACGACGCGGG CGAGATGACG ATCCGGATCG CGTACAACCT GTTCACGCAG AAGCCGAACG CGGAGAAGGA AGACTTCGTG AACTGGACGA AGAGCGTCAA GTACCACGAC GGCACCGACT ACTTCCGCAA CAACGGCGCG GGCGAGATGC TGGCGTTTTC GGCGGCCGAC TTCGAGGACT TCCGCGTGGC GCGTCCGGAT CTGCCCGCAC AGATGGAGGA CGACCTCGAA GGCGTCGTGC GCGTGCTCGC GGAAAACCGC TGGCCGTGGC GCATGCACGC GACCTATGAC GAAACGATCA GCCGCGCGCT CGACGTGTTC GAGAAGGTCA ACGAGGACAT CCCGCTCGAA GGGCTGAACT GGTTCTTCGA TCACGCGGAA ACGATCACTG AGCAATCGAT GGACCGGATC GCCGCGCTCG GCGGCGGTAT CGCGGTGCAG CACCGGATGG CGTACCAGGG CGAATACTTC GTCGAGCGCT ACGGCGCGCA AGCCGCGGAG GCGACGCCGC CGGTCGCGAA GATGCTCGCC AAGGGGCTCA AGGTGTCGGC CGGCACCGAT GCGACGCGCG TCGCGTCGTA CAACCCGTGG GTGTCGCTTG CATGGCTCGT GACCGGCAAG ACGGTCGGCG GCCTGAGGAT GTATCCGCAG CGCAACCTGC TCGATCGCGA AACCGCGCTG CGGATGTGGA CCGAGTACGT GACGTGGTTC TCGAACGAGG AAGGCAAGAA AGGACGCATC GCGGTGGGAC AGCTCGCCGA CCTGATCGTC CCGGATCGCG ATTTCTTCGG GTGCGCGGAG GACGATATCG CCGGCACGAC CGCGTTGCTG ACGGTGGTCG ACGGGAAGAT CGTATGGGGC GCGGGGCCGT TCGCGTCGCA CGACGCACCG ATCCCGCCGG CGATGCCCGA CTGGTCGCCG GTGCGCGAGT TCGGGGGCTA TGGCGGCTGG GGTGCGACGC AGCGCAACGG CGCGCCGCTG CAACGCGCGG CGGCCGCCGC GATGTGCGCC TGCGCGAACG AATGCAACGT TCACCAGCAT GCGCACGCGG GCGCATGGGG CCGCACGTTG CCGACGTCGG ACGCGAAGGG CTTCTGGGGC GCGTTCGGGT GCTCGTGCTG GGCGGTCTGA
|
Protein sequence | MTATVTQPDL ILHNGRFTTL DRANPVATAV AIAAGRFVAV GSEADVMPLA GRATKVVDLG GRGVLPGLID NHCHVIRGGL NYNMELRWDG VPSLALAMEM LKQQVAITPA PQWVRVVGGF TEHQFVEKRL PTIEELNAVA PDTPVFILHL YDRALLNAAA LRVVGYTKDT PEPPGGTILR DAAGNPTGLL LANPNATILY ATLAKGPKLP FEYQYNSTRH FMRELNRLGV TGVIDAGGGS QNYPDDYEVI RKLHDAGEMT IRIAYNLFTQ KPNAEKEDFV NWTKSVKYHD GTDYFRNNGA GEMLAFSAAD FEDFRVARPD LPAQMEDDLE GVVRVLAENR WPWRMHATYD ETISRALDVF EKVNEDIPLE GLNWFFDHAE TITEQSMDRI AALGGGIAVQ HRMAYQGEYF VERYGAQAAE ATPPVAKMLA KGLKVSAGTD ATRVASYNPW VSLAWLVTGK TVGGLRMYPQ RNLLDRETAL RMWTEYVTWF SNEEGKKGRI AVGQLADLIV PDRDFFGCAE DDIAGTTALL TVVDGKIVWG AGPFASHDAP IPPAMPDWSP VREFGGYGGW GATQRNGAPL QRAAAAAMCA CANECNVHQH AHAGAWGRTL PTSDAKGFWG AFGCSCWAV
|
| |