Gene Bcen2424_6344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6344 
Symbol 
ID4454201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp532340 
End bp534229 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content67% 
IMG OID639698409 
Productamidohydrolase 3 
Protein accessionYP_839969 
Protein GI116686722 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.438218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAA CCGTGACCCA ACCGGATCTG ATCCTGCATA ACGGACGATT CACGACGCTC 
GATCGCGCGA ACCCTGTCGC GACGGCGGTC GCGATTGCCG CCGGACGCTT CGTCGCCGTC
GGCAGCGAAG CGGACGTGAT GCCGCTCGCG GGCCGCGCGA CGAAGGTGGT CGATCTCGGC
GGCCGCGGCG TGCTGCCGGG TCTGATCGAC AACCACTGCC ACGTGATTCG TGGCGGACTG
AACTACAACA TGGAACTGCG CTGGGACGGC GTGCCGTCGC TTGCGCTCGC GATGGAGATG
CTCAAGCAGC AGGTCGCGAT CACGCCCGCG CCGCAGTGGG TGCGCGTGGT CGGCGGCTTC
ACCGAACATC AGTTCGTGGA GAAACGGCTG CCGACGATCG AAGAACTGAA CGCAGTCGCG
CCCGATACGC CGGTATTCAT CCTGCATCTG TACGATCGCG CGCTGCTGAA CGCGGCCGCG
CTGCGGGTGG TCGGCTATAC GAAGGACACG CCAGAGCCGC CGGGCGGCAC GATCCTGCGC
GATGCCGCGG GCAACCCGAC CGGCCTGCTG CTCGCGAACC CGAACGCGAC GATCCTTTAC
GCGACGCTCG CGAAAGGCCC GAAGCTGCCG TTCGAGTATC AGTACAACTC GACGCGCCAC
TTCATGCGCG AGCTGAACCG GCTCGGCGTG ACGGGCGTGA TCGACGCGGG CGGCGGTTCG
CAGAATTATC CCGACGATTA CGAAGTGATC CGCAAGCTGC ACGACGCGGG CGAGATGACG
ATCCGGATCG CGTACAACCT GTTCACGCAG AAGCCGAACG CGGAGAAGGA AGACTTCGTG
AACTGGACGA AGAGCGTCAA GTACCACGAC GGCACCGACT ACTTCCGCAA CAACGGCGCG
GGCGAGATGC TGGCGTTTTC GGCGGCCGAC TTCGAGGACT TCCGCGTGGC GCGTCCGGAT
CTGCCCGCAC AGATGGAGGA CGACCTCGAA GGCGTCGTGC GCGTGCTCGC GGAAAACCGC
TGGCCGTGGC GCATGCACGC GACCTATGAC GAAACGATCA GCCGCGCGCT CGACGTGTTC
GAGAAGGTCA ACGAGGACAT CCCGCTCGAA GGGCTGAACT GGTTCTTCGA TCACGCGGAA
ACGATCACTG AGCAATCGAT GGACCGGATC GCCGCGCTCG GCGGCGGTAT CGCGGTGCAG
CACCGGATGG CGTACCAGGG CGAATACTTC GTCGAGCGCT ACGGCGCGCA AGCCGCGGAG
GCGACGCCGC CGGTCGCGAA GATGCTCGCC AAGGGGCTCA AGGTGTCGGC CGGCACCGAT
GCGACGCGCG TCGCGTCGTA CAACCCGTGG GTGTCGCTTG CATGGCTCGT GACCGGCAAG
ACGGTCGGCG GCCTGAGGAT GTATCCGCAG CGCAACCTGC TCGATCGCGA AACCGCGCTG
CGGATGTGGA CCGAGTACGT GACGTGGTTC TCGAACGAGG AAGGCAAGAA AGGACGCATC
GCGGTGGGAC AGCTCGCCGA CCTGATCGTC CCGGATCGCG ATTTCTTCGG GTGCGCGGAG
GACGATATCG CCGGCACGAC CGCGTTGCTG ACGGTGGTCG ACGGGAAGAT CGTATGGGGC
GCGGGGCCGT TCGCGTCGCA CGACGCACCG ATCCCGCCGG CGATGCCCGA CTGGTCGCCG
GTGCGCGAGT TCGGGGGCTA TGGCGGCTGG GGTGCGACGC AGCGCAACGG CGCGCCGCTG
CAACGCGCGG CGGCCGCCGC GATGTGCGCC TGCGCGAACG AATGCAACGT TCACCAGCAT
GCGCACGCGG GCGCATGGGG CCGCACGTTG CCGACGTCGG ACGCGAAGGG CTTCTGGGGC
GCGTTCGGGT GCTCGTGCTG GGCGGTCTGA
 
Protein sequence
MTATVTQPDL ILHNGRFTTL DRANPVATAV AIAAGRFVAV GSEADVMPLA GRATKVVDLG 
GRGVLPGLID NHCHVIRGGL NYNMELRWDG VPSLALAMEM LKQQVAITPA PQWVRVVGGF
TEHQFVEKRL PTIEELNAVA PDTPVFILHL YDRALLNAAA LRVVGYTKDT PEPPGGTILR
DAAGNPTGLL LANPNATILY ATLAKGPKLP FEYQYNSTRH FMRELNRLGV TGVIDAGGGS
QNYPDDYEVI RKLHDAGEMT IRIAYNLFTQ KPNAEKEDFV NWTKSVKYHD GTDYFRNNGA
GEMLAFSAAD FEDFRVARPD LPAQMEDDLE GVVRVLAENR WPWRMHATYD ETISRALDVF
EKVNEDIPLE GLNWFFDHAE TITEQSMDRI AALGGGIAVQ HRMAYQGEYF VERYGAQAAE
ATPPVAKMLA KGLKVSAGTD ATRVASYNPW VSLAWLVTGK TVGGLRMYPQ RNLLDRETAL
RMWTEYVTWF SNEEGKKGRI AVGQLADLIV PDRDFFGCAE DDIAGTTALL TVVDGKIVWG
AGPFASHDAP IPPAMPDWSP VREFGGYGGW GATQRNGAPL QRAAAAAMCA CANECNVHQH
AHAGAWGRTL PTSDAKGFWG AFGCSCWAV