Gene Bcen2424_6342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6342 
Symbol 
ID4454199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp531299 
End bp531985 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID639698407 
Productisochorismatase hydrolase 
Protein accessionYP_839967 
Protein GI116686720 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC CCAAGCTTGA AGTACTTACC CCGCACAACA GCCAACTGAT CTTCATCGAT 
CAGCAGCCGC AGATGGCGTT CGGCGTGCAG TCGATCGATC GGCAGACGCT GAAGAACAAC
GTCGTCGGGC TCGCGAAGGC CGCGAAGGTC TTCAACATCC CCACCACGAT CACGACGGTC
GAAAGCGAGA GCTTCTCGGG CCACACCTAT CCCGAGCTGC TCGACGTGTT CCCGAACCAG
AAGACGCTCG AACGCACGTC GATGAACTCG TGGGACGACC AGAAGGTGCG CGACGCGCTC
GCCGCGAACG GCCGCAAGAA GGTGGTCGTG TCGGGCCTGT GGACCGAAGT CTGCAATACG
ACGTTCGCGC TCTGCGCGAT GCTCGAAGGC GACTACGAGA TCTACATGGT CTCCGACGCA
TCGGGCGGCA CGACGCAGGC CGCGCACGAT ATCGCGATGC AGCGCATGGT CCAGGCCGGC
GTCGTGCCGG TCACGTGGCA GCAGGTCCTG CTCGAATGGC AGCGCGACTG GGCACGCCGC
GAGACGTATG ACGCGGTGAT GGCGATCGCG AAGGAGCACT CGGGCGCCTA CGGGATGGGC
GTGGACTATG CGTACACGAT GCTCCACAAG GCACCGCAGC GCACCGCGAC GCCGCACGAG
TCGATTGCGC CCGTGCCGGC GAAGTAA
 
Protein sequence
MSNPKLEVLT PHNSQLIFID QQPQMAFGVQ SIDRQTLKNN VVGLAKAAKV FNIPTTITTV 
ESESFSGHTY PELLDVFPNQ KTLERTSMNS WDDQKVRDAL AANGRKKVVV SGLWTEVCNT
TFALCAMLEG DYEIYMVSDA SGGTTQAAHD IAMQRMVQAG VVPVTWQQVL LEWQRDWARR
ETYDAVMAIA KEHSGAYGMG VDYAYTMLHK APQRTATPHE SIAPVPAK