| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6310 |
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| Symbol | |
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| ID | 4454474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 494234 |
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| End bp | 496021 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639698375 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_839935 |
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| Protein GI | 116686688 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.683934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.626612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGC TTACCGGAAG TCAAATCGTC GCCCAGACGT TGAAGAACTA CGGTGTCGAA
TACGTCGCCG GCATTCCCGG TCACGGCATC TGGACGCTGA CGGACGCGTT CCTCGAGAAG
GACTCGGAGA TTCGCTTCAT CCAGGTGTTT CACGAGCAAA GCGCGGTGCA TCTGGCCGAC
GGCTACTACC GTGTGTCGGG CAAGCCGATG GCGGCAGTCA CGTCGATCGG CGCCGGCGCG
AGCAATACGG TCATCGGAAT GGCAACGGCC TTCACCGATT CGACGAGCGT CATGCTCATC
ACCGGCGGGC CGCCCACGCA CATGCGCGGT CACGGCCTGC TTCAGGAACT CGAACGCTAC
GTCGACAACG ATTTCCCGAA GATCGCCGAA GCCGTGTCCA AGCGTCATTG GGTGGCCCAG
CGCGTCGAGG AGTTGCCGTT CATCATGCAT CGCGCATTCA GCTCGATGCT GACCGGCCGC
CCCGGCCCGG TTCACGTCGA GATTCCGATG GACACACAGG CCGAGGCCGC GGAAGTCACG
CTGCACCAGC TCGAGGAACG CGTGCCGCTC GGCAAGGTGT ATCCGGACCC CATCGCCGTC
GAAAAAGCGG CGGACGTGCT TCGGCAGGCC AGGCGCCCGG TGATGGTCAT CGGCGGCGGC
GTCATCACCG GCGAAGCGGC CGCGGAAGTG CTTGCGCTCG CCGAGAAGTG GCAGATTCCG
GTCGTCACCA CCTGGAACGG CAAGAGCGGC TTCCCCGAAG ACCATGCGCT GTTCGCGGGC
AGCGTCGGCC AAACCGGCAC GATGTGCGGC AACAAGGTCG CATCGAGCGC GGACGTGATC
ATCGCGGTCG GCTGCCGTTT TACCGACTGG TCGTCGTCGA GCTACGCGAA AGGCGTCACG
TTCTCGATTC CGCCCGGCAA ACTGATCCAC ATCGACATCG ATCCGCACGA GATCGGCAAG
AACTATCCGG TCGCCGTCGG CATCGTGGCC GACGCGAAGT ACGCGCTCGC CCATATCGTC
GAAGCGCTCG AAGGCGATGC GGCCGAGCGC GGCGAATATC TGGCCGAGGT CGCCGCGCAC
AAGGCGGAAT GGGAAGCCAA GCTGGCCACG CGCCGCGATT CCGACCGCTT CCCGTTCACA
TCGCAACGGC CGCTCGGCGC GCTGCGCAAG ATCTTCCCGC GCGACACCAT CGTGGTGGTC
GGCTCGGGCA ATACCCAGGG CGCGGTCAAA CAGACCTTCC CGGTCTACAC CCCGCGTACC
CACCTGACCT CCGGCGGTTT TTCGTCGATG GGCTGGGCGG TGCCCGCCGC CATCGGGGCG
AAGCTCGCGA AGCCGGACAG CCCGGTGGTA TGCATTCTCG GTGACGGCGA CTTCCTGATG
ACGTCGCAGG AAATCGCGAT TTGCGTCACC AACAACCTGC CGGTGATCTT CATCGTCCAG
AACAACGCAG GGTATATGTC GATTCGCGGC GGCCAGCGCA AGCAGACGAG CCGTCATATC
GGTACCGAGT TCAACTATCC GGACGGACGC CCGTACTCGC CCGACTTCGA GGCGGTCGGC
AAGGCATTCG GTCTCAAGTC GTGGCGCGTC AACAGCAATG ACGAACTCGA GCCGATCCTC
CAGCAGGCGC TCGACAGCAA CGCGCCGTGC CTGATCGAGA TTCCAACGGA TCGCGACGCG
GCCGGACCGT GGGTGCCGGG CTGGTGGGAT TTCCCGATTC CGGCCTATAT CGACGACGAG
CGCCAGGAAG AGTACGCGCA ATTCCGCAAC TCAGAGCAAC ATCTGTAA
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| Protein sequence | MAKLTGSQIV AQTLKNYGVE YVAGIPGHGI WTLTDAFLEK DSEIRFIQVF HEQSAVHLAD
GYYRVSGKPM AAVTSIGAGA SNTVIGMATA FTDSTSVMLI TGGPPTHMRG HGLLQELERY
VDNDFPKIAE AVSKRHWVAQ RVEELPFIMH RAFSSMLTGR PGPVHVEIPM DTQAEAAEVT
LHQLEERVPL GKVYPDPIAV EKAADVLRQA RRPVMVIGGG VITGEAAAEV LALAEKWQIP
VVTTWNGKSG FPEDHALFAG SVGQTGTMCG NKVASSADVI IAVGCRFTDW SSSSYAKGVT
FSIPPGKLIH IDIDPHEIGK NYPVAVGIVA DAKYALAHIV EALEGDAAER GEYLAEVAAH
KAEWEAKLAT RRDSDRFPFT SQRPLGALRK IFPRDTIVVV GSGNTQGAVK QTFPVYTPRT
HLTSGGFSSM GWAVPAAIGA KLAKPDSPVV CILGDGDFLM TSQEIAICVT NNLPVIFIVQ
NNAGYMSIRG GQRKQTSRHI GTEFNYPDGR PYSPDFEAVG KAFGLKSWRV NSNDELEPIL
QQALDSNAPC LIEIPTDRDA AGPWVPGWWD FPIPAYIDDE RQEEYAQFRN SEQHL
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