Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6309 |
Symbol | |
ID | 4454473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 492617 |
End bp | 494221 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639698374 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_839934 |
Protein GI | 116686687 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.448971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.597714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATG CAACGTTTGT TCATCGTCCG GCGTCCGGTC TGTCCAGTTT CGCGCCGGTG CTCCGGCGCG AAATCCCGAC GGTCGTGCCC GGCAGCGATG GAATCATTAC CTGCGACGTG GTCATCGTGG GGTCCGGCAT GGGCGGCTCG AGTTTCGCGC AAGGCATCGC AGGTCACGGC CTCGACGTGC TCATCGTCGA GCGCGGCGAT TTCCTGCCTC GTGAAATCCA GAACTGGCAG GCCGAAGCCG TATTTCGCGA CGGACGCTAC CGCAACGCGG AGTCGTGGGA CGACGACGCC GGCAAGCCGT TTTCACCCGG CGTGTTCTAC TACGTCGGCG GCAACACGAA GGTCTTCGGC GCAATGCTTC CACGGTTCAG GGAAGCCGAT TTCGGCGCGA TTCAACACGC CGAGGGTATT TCGCCCGCGT GGCCGATCAC TTATGCCGAC ATGGAGCCGT ACTACGCGGC CGCGGAGCGG CTTTACAACG TCCATGGCGC GGGTGGCCAG GACCCGACCG ATCCGTGGCG CTCCGGCGAC TATCCGTTTC CCGCGCTGGA ACACGACCCC GCGTTGCGGC CGCTCGCCGC GGCGATGCGT GCGCAAGGCC TTCGTCCGTT CGTGATGCCG GCGGCCGTCA ACTACGGACG CGAACGGCCG TGCGTGCTCT GCTCGACCTG CGACGGTTAT CCCTGCCTCG TCGATGCGAA GGGCGATGCG GAAGTGTCCG TGCTGAGGCC GCTCGTCGGC AGCGGCGGCG CACAACTGAT GGTACGCACC CGAATCGATC GTCTCGTCAT GTCGGCCGAC GGCACGCGCA TCGAGGAGGC GCTCGGCGTT CGCGACGGGC AACCCGTTCG CATCCGTGCC AAGCGGTTCG TCCTTGCGTG TGGCGCGGTG AACTCGGCGG CCCTTCTGCT GCGATCGGCC GATCACGCGC ATCCGGAAGG TATCGGCAAC CGCTCGGGGA TGCTCGGCCG CAACTATATG GTTCACAACA GCACGTTCAT GCTCGCGGTC GATCCGCGTC GCGCCAACGA CGTGCTGTTC CAGAAAACGC TCGCGGTCAA CGACTGGTAT TTGCGTTCCC CGCAGAACGC GTTTCCGCTC GGTAACGTGC AGATGCTCGG CAAGATCCGC GAGCCGATGG TGACGGGCAT GTATCCGTGG CTGCCGAAGG CCGTTTCGCG CTACATGACC GACCACAGCG TCGATCTGTA CCTGACCAGC GAGGATCTTC CCGATCCGGA GAATCGCGTC ACGGTCGATC CGCAGTCGGG CCGCATCCGC ATCAGGTGGC GTGCCAACAA CCTGCGTGCA CACCGGGCGC TCGTGAAGAA GACGGTCGCG ATGATGCGGC GGGCCGGGTA TCCGCTCGTG TTGAACAAGC GTATGGGCAT TGCAACCAAC TCGCATCAAT GCGGCACGGC CGTGATGGGC AACGACCCGG GCACGAGTGT GCTCGACACG AACTGCAGGC TTCACGACGT GGAAAACGCG TGGATCGTCG ACAGTTCGTG GTTCCCGTCC TCCGCGGCGG TGAATCCGGC GCTCACGATC GCCGCGAATG CGCTTCGTGT GGCCAGGCAG TTCGTCGGTC GCTGA
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Protein sequence | MSDATFVHRP ASGLSSFAPV LRREIPTVVP GSDGIITCDV VIVGSGMGGS SFAQGIAGHG LDVLIVERGD FLPREIQNWQ AEAVFRDGRY RNAESWDDDA GKPFSPGVFY YVGGNTKVFG AMLPRFREAD FGAIQHAEGI SPAWPITYAD MEPYYAAAER LYNVHGAGGQ DPTDPWRSGD YPFPALEHDP ALRPLAAAMR AQGLRPFVMP AAVNYGRERP CVLCSTCDGY PCLVDAKGDA EVSVLRPLVG SGGAQLMVRT RIDRLVMSAD GTRIEEALGV RDGQPVRIRA KRFVLACGAV NSAALLLRSA DHAHPEGIGN RSGMLGRNYM VHNSTFMLAV DPRRANDVLF QKTLAVNDWY LRSPQNAFPL GNVQMLGKIR EPMVTGMYPW LPKAVSRYMT DHSVDLYLTS EDLPDPENRV TVDPQSGRIR IRWRANNLRA HRALVKKTVA MMRRAGYPLV LNKRMGIATN SHQCGTAVMG NDPGTSVLDT NCRLHDVENA WIVDSSWFPS SAAVNPALTI AANALRVARQ FVGR
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