Gene Bcen2424_6309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6309 
Symbol 
ID4454473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp492617 
End bp494221 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content65% 
IMG OID639698374 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_839934 
Protein GI116686687 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.448971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.597714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG CAACGTTTGT TCATCGTCCG GCGTCCGGTC TGTCCAGTTT CGCGCCGGTG 
CTCCGGCGCG AAATCCCGAC GGTCGTGCCC GGCAGCGATG GAATCATTAC CTGCGACGTG
GTCATCGTGG GGTCCGGCAT GGGCGGCTCG AGTTTCGCGC AAGGCATCGC AGGTCACGGC
CTCGACGTGC TCATCGTCGA GCGCGGCGAT TTCCTGCCTC GTGAAATCCA GAACTGGCAG
GCCGAAGCCG TATTTCGCGA CGGACGCTAC CGCAACGCGG AGTCGTGGGA CGACGACGCC
GGCAAGCCGT TTTCACCCGG CGTGTTCTAC TACGTCGGCG GCAACACGAA GGTCTTCGGC
GCAATGCTTC CACGGTTCAG GGAAGCCGAT TTCGGCGCGA TTCAACACGC CGAGGGTATT
TCGCCCGCGT GGCCGATCAC TTATGCCGAC ATGGAGCCGT ACTACGCGGC CGCGGAGCGG
CTTTACAACG TCCATGGCGC GGGTGGCCAG GACCCGACCG ATCCGTGGCG CTCCGGCGAC
TATCCGTTTC CCGCGCTGGA ACACGACCCC GCGTTGCGGC CGCTCGCCGC GGCGATGCGT
GCGCAAGGCC TTCGTCCGTT CGTGATGCCG GCGGCCGTCA ACTACGGACG CGAACGGCCG
TGCGTGCTCT GCTCGACCTG CGACGGTTAT CCCTGCCTCG TCGATGCGAA GGGCGATGCG
GAAGTGTCCG TGCTGAGGCC GCTCGTCGGC AGCGGCGGCG CACAACTGAT GGTACGCACC
CGAATCGATC GTCTCGTCAT GTCGGCCGAC GGCACGCGCA TCGAGGAGGC GCTCGGCGTT
CGCGACGGGC AACCCGTTCG CATCCGTGCC AAGCGGTTCG TCCTTGCGTG TGGCGCGGTG
AACTCGGCGG CCCTTCTGCT GCGATCGGCC GATCACGCGC ATCCGGAAGG TATCGGCAAC
CGCTCGGGGA TGCTCGGCCG CAACTATATG GTTCACAACA GCACGTTCAT GCTCGCGGTC
GATCCGCGTC GCGCCAACGA CGTGCTGTTC CAGAAAACGC TCGCGGTCAA CGACTGGTAT
TTGCGTTCCC CGCAGAACGC GTTTCCGCTC GGTAACGTGC AGATGCTCGG CAAGATCCGC
GAGCCGATGG TGACGGGCAT GTATCCGTGG CTGCCGAAGG CCGTTTCGCG CTACATGACC
GACCACAGCG TCGATCTGTA CCTGACCAGC GAGGATCTTC CCGATCCGGA GAATCGCGTC
ACGGTCGATC CGCAGTCGGG CCGCATCCGC ATCAGGTGGC GTGCCAACAA CCTGCGTGCA
CACCGGGCGC TCGTGAAGAA GACGGTCGCG ATGATGCGGC GGGCCGGGTA TCCGCTCGTG
TTGAACAAGC GTATGGGCAT TGCAACCAAC TCGCATCAAT GCGGCACGGC CGTGATGGGC
AACGACCCGG GCACGAGTGT GCTCGACACG AACTGCAGGC TTCACGACGT GGAAAACGCG
TGGATCGTCG ACAGTTCGTG GTTCCCGTCC TCCGCGGCGG TGAATCCGGC GCTCACGATC
GCCGCGAATG CGCTTCGTGT GGCCAGGCAG TTCGTCGGTC GCTGA
 
Protein sequence
MSDATFVHRP ASGLSSFAPV LRREIPTVVP GSDGIITCDV VIVGSGMGGS SFAQGIAGHG 
LDVLIVERGD FLPREIQNWQ AEAVFRDGRY RNAESWDDDA GKPFSPGVFY YVGGNTKVFG
AMLPRFREAD FGAIQHAEGI SPAWPITYAD MEPYYAAAER LYNVHGAGGQ DPTDPWRSGD
YPFPALEHDP ALRPLAAAMR AQGLRPFVMP AAVNYGRERP CVLCSTCDGY PCLVDAKGDA
EVSVLRPLVG SGGAQLMVRT RIDRLVMSAD GTRIEEALGV RDGQPVRIRA KRFVLACGAV
NSAALLLRSA DHAHPEGIGN RSGMLGRNYM VHNSTFMLAV DPRRANDVLF QKTLAVNDWY
LRSPQNAFPL GNVQMLGKIR EPMVTGMYPW LPKAVSRYMT DHSVDLYLTS EDLPDPENRV
TVDPQSGRIR IRWRANNLRA HRALVKKTVA MMRRAGYPLV LNKRMGIATN SHQCGTAVMG
NDPGTSVLDT NCRLHDVENA WIVDSSWFPS SAAVNPALTI AANALRVARQ FVGR