Gene Bcen2424_6305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6305 
Symbol 
ID4454469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp488514 
End bp489431 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content60% 
IMG OID639698370 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_839930 
Protein GI116686683 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.507807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACAA CGACAGTCTC TGACACGGCC CGGCACGTGC GTCGCGTGTC CCGCCCGTCG 
AGCACGACGC TGCGTGTGGT CGCGCGTGCG GTGCTCTATG CGATTCTCGT CGGCAGCGCG
GCTTTCTTCG TGATGCCGCT CGTCGTGATG GTCTTCGCTT CGTTCAAGGA CATGGCGGAG
ATCCGGTCGA CGTCGATTCT ATCCTTTCCG CTCGCGCCCA CGGTCCAGCC GTGGATCGAT
GCATGGCAAA ACGCGTGCGT CGGCATCGAC TGCGTGGGCC TGAACGGGTT CTACGTGCGG
ACCGTGCTGA TCGTCGTGCC TGCCGTCGTG TTGTCCACGC TGCTTGGCGC ATTGAATGGC
TACGCGTTGA CGAAATTCAA TTTCAGAGGA TCGAAGTTCG TCTATGGGGT GATCCTGTTC
GGCACCTTTA CGCCATATCA ATCCGTGTTG ATACCGCTTG CGAAGACGCT GGGCGTACTC
GGCCTGTCAG GTAGCCTTGC AGGCCTCGTG CTCGTGCATA CGGTCTACGG CTTGCCGTTC
ACGACGATGT TCTTTCGCAA CTACTTCATG ACGGTGCCGC AGGATCTCGT GAAGGCGGCG
CGGGTCGATG GAGCGGGTTT CTGGACGACG TTCGCGTACA TCATCCTGCC GCTGTCGGTA
CCGATGATCG TCGTTACCGT GATCTGGCAG TTCACGTCGA TCTGGAATGA CTTCCTGTTC
GGCGTGTCGT TCACGAGCGG TCAGAACACG CCCATCATGG TTGCGCTGAA CAACATGGTG
AGTGCGAGCG CGGGCGAACG TCCGTACAAC GTCCATATGG CCGGTGCGTT GCTGGCCGCT
CTTCCAACCC TCGTCATTTA TTTCCTGGCG GGCAAGTATT TCGTGCGCGG CCTGATGGCC
GGCGCGGTCA AGGGGTAA
 
Protein sequence
MNTTTVSDTA RHVRRVSRPS STTLRVVARA VLYAILVGSA AFFVMPLVVM VFASFKDMAE 
IRSTSILSFP LAPTVQPWID AWQNACVGID CVGLNGFYVR TVLIVVPAVV LSTLLGALNG
YALTKFNFRG SKFVYGVILF GTFTPYQSVL IPLAKTLGVL GLSGSLAGLV LVHTVYGLPF
TTMFFRNYFM TVPQDLVKAA RVDGAGFWTT FAYIILPLSV PMIVVTVIWQ FTSIWNDFLF
GVSFTSGQNT PIMVALNNMV SASAGERPYN VHMAGALLAA LPTLVIYFLA GKYFVRGLMA
GAVKG