Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6304 |
Symbol | |
ID | 4454468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 487577 |
End bp | 488536 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639698369 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_839929 |
Protein GI | 116686682 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.510445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAG AAACCACACG GAGATTCGAG ATGTCTTTTT CCCCAGGAGG CGGCATCCAT GCCGGAGCGC CCGGGCAGCG GCGACGCTGG CTGCGCGCGA GCCCCGCAGC CCTTACGCTG GCGCCGAGTG TCGTCGTACT TTTGATTGCC GTCTATGTGT TCATCGGCTG GTCGATCGTC ATCTCGTTCA CCAGTTCGAA GTTCGCGCCG AACTACGACT TCGTCGGTCT TGCGCAGTAT GCAAGGCTAT GGGATTCGGA TCGATGGAAT GTCGCGGTAA CGAACCTCGG TTTGTTCTCG ATCGCGTTCA TGCTGATCTC GCTCGTGCTC GGCCTGCTGC TCGCGATTTT TCTCGACCAG AAGGTGCGGG GCGAGGGGGC GTTCCGGATG ATCTATCTGT ATCCGATGGC CGTGTCGTTG ATCGTGACCG GCACCGCGTG GAAGTGGATC CTGAATCCCG GCCTCGGGCT GGAAAAGCTG CTGCAGGATC TCGGCATCAC CGGCATCCAT GTCAACTGGC TGATCGACCC GCAGATGGCG GTCTATACGC TTGTCGTCGC CGCCGTCTGG CAAACCGCGG GCTTCGTGAT GGCGATCTTC CTGGCGGGCC TGCGCGGGAT CGACGGCGAA ATCATCAAGG CGGCGCGCAT GGAGGGCGCC GGCACGCTGC GCATCTATCT GACCATCATC ATCCCGATGC TGCGCGCGTC CGTATTCAGC GTGGTCGTGA TCCTGATCTA CCAGGCGGTG CGGTCGTTCG ACCTTGTCGT GGCGCTGACG AACGGCGGCC CGGGTTTCTC GAGCGACCTG CCGACGACGT TCATGTACAA CCTGACGTTC AGCCGCGGCC AGCTCGCGCA GGGCGCCGCC AGCTCCGTCA TGATCCTGCT CGTCGTGGTC GCCCTTACCG TCCCGTATCT CTACTCGGAG TTCAAGCGTG AACACAACGA CAGTCTCTGA
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Protein sequence | MKAETTRRFE MSFSPGGGIH AGAPGQRRRW LRASPAALTL APSVVVLLIA VYVFIGWSIV ISFTSSKFAP NYDFVGLAQY ARLWDSDRWN VAVTNLGLFS IAFMLISLVL GLLLAIFLDQ KVRGEGAFRM IYLYPMAVSL IVTGTAWKWI LNPGLGLEKL LQDLGITGIH VNWLIDPQMA VYTLVVAAVW QTAGFVMAIF LAGLRGIDGE IIKAARMEGA GTLRIYLTII IPMLRASVFS VVVILIYQAV RSFDLVVALT NGGPGFSSDL PTTFMYNLTF SRGQLAQGAA SSVMILLVVV ALTVPYLYSE FKREHNDSL
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