| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6296 |
|---|
| Symbol | |
|---|
| ID | 4454460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 477269 |
|---|
| End bp | 478687 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639698361 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_839921 |
|---|
| Protein GI | 116686674 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.957255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.770519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCT TCAGTTATTG GGATACCGCC ACCATCATCG GGATGGTGGT TGCCTACATC
GTGGTGACGA GCGTGGTTAG TATCCGGCTG CGCAGCCGCA ATTCCGAACA GTTCATGGTG
GCCGGGCGTT CGATGCCGGC GCTGGTGGTC GCGATCCTGC TGATGTCGGA ATTCATCGGC
GCGAAATCGA CCGTCGGCAC GTCGCAGGAG GCGTTCTCGG CCGGCATCGC CGCGTCGTGG
TCGGTGCTCG CGGCCGCCAT CGGTTTCCTG CTCTTCGGCC TGTTCATGGC CCGGCGCCTG
TACGCATCCG GTGAATTCAC GATCTCCGGA TTCATCGCGC AGCGATACGG GCACGGTGCG
AAGCTCGCCG TTTCCGCGAT CATGATCTAT GCGCTGTTTG TCGTGAACGT CGGCAACTAC
GTGAGCGGCG CGGCGGCGAT CTCGACGGTC ATGCGCATCA ACCTGCCGAC GGCCGCCGTC
ATCACCGCGA TCGTCAGCAC GATCTATTTC GTGTGGGGCG GCCTCAAGAG CGTCGCATAC
CTGACGGTCG TGCACAGCGC CGTGAAGCTG CTCGGCATCG CCATTCTGGT CGGCGTCGCG
TGGAAGCTGT CGGGCGGTAT CGCGCCGATG GCACGGAGCC TGCCCGCGCA CTACTTCACG
TGGTCCGGTG CGCTGTCGGG CGGCACGATC GGCGCATGGA TCATCGGCAC GGCCGGGGCG
ATCTTCTCGA CGCAGTTCAT CATCCAGGCG ATCTCGGCCA CCCGCAGCCC CGAGGGGGCG
CGTGCATCGT CGCTGATCGC CGCGTTCCTG TGCGTGCCGA TCGCGCTCGC GCTCGGCTTC
ATCGGCGTGG CGGCCAAGTA CCTGTATCCC GGCGTCAAGA GCCTGTACGC GCTGCCCGTC
TTCCTGCAGC ACATGAATCC AATCCTGGCC GGCATCGTCA CGACGTCGCT CGTGGCATCG
ATCTTCGTCA GCGTATGCAC CGTCGCACTG GCGATCGCGT CGCTGATCGT GAAGGACTTC
TATGTGCCGC GTTTCAATCC GACGCCCGAC GTCGAACTGA GAATGACGCG CTGGATCTCG
CTGATCGTCG GCTTCCTGCC GCTGATCTTC GTGCTGTTCG TCCCGCAGAT CCTCGCGCTG
TCGTTCTTCA GTCGCGCGCT GCGGCTGTCC GTGTCGGTCG TCGCGCTGAT CGGCATCTAT
CTGCCGTTCT TCAGCGGCAA GCGCGGTGCC GTGTCGGCCC TCGTCGTCGC GACGCTCGCC
ACGACGTTCT GGTACCTGCT CGGCAACCCG TTCGGCATCG ACAACATGTA CGTCGCACTC
GTGACGCCGG CCATCGTGCT GGTGATCGGC AAGCTGCTGT TTCATGGCGA TGGCGCGAAC
CTTCGCGACA AGCCGCTCAC GCATCGCGAA TCGCACTGA
|
|---|
| Protein sequence | MATFSYWDTA TIIGMVVAYI VVTSVVSIRL RSRNSEQFMV AGRSMPALVV AILLMSEFIG
AKSTVGTSQE AFSAGIAASW SVLAAAIGFL LFGLFMARRL YASGEFTISG FIAQRYGHGA
KLAVSAIMIY ALFVVNVGNY VSGAAAISTV MRINLPTAAV ITAIVSTIYF VWGGLKSVAY
LTVVHSAVKL LGIAILVGVA WKLSGGIAPM ARSLPAHYFT WSGALSGGTI GAWIIGTAGA
IFSTQFIIQA ISATRSPEGA RASSLIAAFL CVPIALALGF IGVAAKYLYP GVKSLYALPV
FLQHMNPILA GIVTTSLVAS IFVSVCTVAL AIASLIVKDF YVPRFNPTPD VELRMTRWIS
LIVGFLPLIF VLFVPQILAL SFFSRALRLS VSVVALIGIY LPFFSGKRGA VSALVVATLA
TTFWYLLGNP FGIDNMYVAL VTPAIVLVIG KLLFHGDGAN LRDKPLTHRE SH
|
|---|
| |