| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6294 |
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| Symbol | |
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| ID | 4454458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 474843 |
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| End bp | 476120 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639698359 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_839919 |
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| Protein GI | 116686672 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.830951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.498392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCGC TCGCCCCGCA CGCAGCACGG CTGCTGATCG TCGCCGACGA CCTGTCGGGC
GCGGCCGACT GCGCGGTTGC CGGGTTGCGT CACGGCCTGA CGGCCATGGT CGTGCTCGAT
GCCGCGCACG CGGCGGCGGC GCCACATGGG GTCGACATTC TGTCGATCGA CGTGGATTCG
CGCCGCTTGC CGAAGGACGT GGCCGCGCGA CGCACCGTCG ATGCGGTCGC GTCGTTGTCG
AATGCCGGCA CGCGCCTCTA CAAGAAGGTG GACTCGACGC TGCGCGGCAA CTTCGCGGCG
GAAGTCGCCG CGCTGACGTC GCGCGCCGGA ATGGCGATCG TGTGCCCGGC CTACCCGGCC
TCGGGACGCA CGACCATCGA CGGCCGCCAA TGGGTGCGCG GCGTGCCCGT GGAAGCGAGC
GAATACTGGC GCAACGAACA CATCCCGGGC ACGGCAGATC TCGTTGCATT GCTGTCCGCC
GAAGACCTGC GTGTCGCCTA CACGGCAATC GGTACGGTGC GCGACAACGC AAACGCGCTC
ACCGCGCATC TGCGCGAGCT GCAATCCGAC CGCGTGCAAG CCGTCGTGTG CGACGCGGAA
TCCGACGACG ACCTGCAACG CATCGCGCGT GCATCCGCGG CGCTCGACGG CGTGTTCTGG
GTCGGCTCGG CCGGCCTGGC CCCCGGCGTC ATCGAAGCGC TGGGGCCACC GCATGGCGCG
AGCGGGCCGA CGGCCGGCGG CCCGCATTCG AAAGGCCCCG TGCTGACGGT CGTAGGCAGC
ATGTCGAGCA TTTCGCATGC GCAGCTGGAC TGCCTCAAGG CGAACGCGGG CACCCATCTC
GTTGCGCTCG AAGTCAGCGT CTGCGCGCTG GACGACACGC GAAGCGACGT CACGACCGTG
GCAAGCGACG CGCTGCGTGG CGGCCGGCAT GTCGTCGTCT CGTTGAGCCA GGCACGGCGC
GGCGACGTCA ATGACGGGCT GCTGTTCTCC ACGCGCCTCG CCGCGCTGCT CGCGCCAGCC
GTGCGCCACG CCGGCGCAAT CATCGCGACC GGCGGCGAAA CGGCACGCGC GCTGCTCACC
GCGGCCGGCG CGAGCGCGCT GCGTGTCGTC GACGAAATCG AGGACGGCAT GCCGCTGCTC
GAATGCCGGC TGCACGGCAA CGCACTGCCC GTCGTGACCA AGGCCGGCGG TTTCGGCCAG
CCCGAATCGA TTTATCACGC CTGGCGCCGG CTTGCGAACA CAGGCGAGCC GGCCGACACG
GCCCAACCCA ATCAGTGA
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| Protein sequence | MNALAPHAAR LLIVADDLSG AADCAVAGLR HGLTAMVVLD AAHAAAAPHG VDILSIDVDS
RRLPKDVAAR RTVDAVASLS NAGTRLYKKV DSTLRGNFAA EVAALTSRAG MAIVCPAYPA
SGRTTIDGRQ WVRGVPVEAS EYWRNEHIPG TADLVALLSA EDLRVAYTAI GTVRDNANAL
TAHLRELQSD RVQAVVCDAE SDDDLQRIAR ASAALDGVFW VGSAGLAPGV IEALGPPHGA
SGPTAGGPHS KGPVLTVVGS MSSISHAQLD CLKANAGTHL VALEVSVCAL DDTRSDVTTV
ASDALRGGRH VVVSLSQARR GDVNDGLLFS TRLAALLAPA VRHAGAIIAT GGETARALLT
AAGASALRVV DEIEDGMPLL ECRLHGNALP VVTKAGGFGQ PESIYHAWRR LANTGEPADT
AQPNQ
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