| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6292 |
|---|
| Symbol | |
|---|
| ID | 4454025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 472770 |
|---|
| End bp | 473666 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639698357 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_839917 |
|---|
| Protein GI | 116686670 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase
[TIGR00683] N-acetylneuraminate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.454745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATTG CGTTCAAGGG AATCGTTCCC GCGCTGATCA CGCCGATGAC GGCGAACGAG
AACGTCGATG AAGACGGCCT GCGCGCGCTG GTCGAGCGGC TCATCGAGGC CGGCGTGCAC
GGCCTGTTCG TGCTCGGCAC CAACGGTGAA TTCATCGCGC TGAATGAAGA AGAGAAGCTG
CGCATCGCGC GGATCGCGGT CAGTCAGGCA CGTTCGCGCG TGCCGGTCAT CGCGGGAACC
GGTGCGTATG CGACGCGCGA CGTGATCGAC CTGAACCGGA AGATGGCCGA TGCCGGCGTC
GATGCCGTGT CCGTGATCAC GCCGTATTTC AACGGCGCCA CGCAGCCGGA ACTCTACGCG
CACTACAAGC AGATCGCCGA CGCGACGCCG CTGCCGGTCA TGCTTTACAC GATTCCCGCG
AAAGCGGGCA TCACGCTGAC CGTCGATACG GTGCGCCGCC TCGCGGAGAT TCCGAACATC
CGCGGCATCA AGGATAGCGG CGGCGACTTC GACCGGTTGC TGCAACTGAT CGACCTGCGG
CGCGACGATT TCGCGGTCTT CACCGGCACC GACTCGATGA TCCTCTGGAC GCTGATCGCC
GGTGGCGACG GCGCGGTCGC CGCGACGACC AACGCCGTCC CGCATGTCGT GATGTCGATC
TGGAACAAGT TCCACGCCGG CGATATCGCC GGCGCACGCA CCGCGCAGGA GTCGCTGCGC
GCGCTGCGCG ACGCATTCGC ACTCGGCACG ATGCCCGTCG TGCTGAAAAC CGCCGCGCAG
ATGCTCGGGA TGCCGGCCGG CCCTGCGCGC TCGCCCGCGC AGCCGCTCGA TGCCCAGGCC
CGCGAGCGCC TCGCGCAAGC GCTCTCCGTC TACCGCGACG CCGCGCGCGG CCACTGA
|
|---|
| Protein sequence | MSIAFKGIVP ALITPMTANE NVDEDGLRAL VERLIEAGVH GLFVLGTNGE FIALNEEEKL
RIARIAVSQA RSRVPVIAGT GAYATRDVID LNRKMADAGV DAVSVITPYF NGATQPELYA
HYKQIADATP LPVMLYTIPA KAGITLTVDT VRRLAEIPNI RGIKDSGGDF DRLLQLIDLR
RDDFAVFTGT DSMILWTLIA GGDGAVAATT NAVPHVVMSI WNKFHAGDIA GARTAQESLR
ALRDAFALGT MPVVLKTAAQ MLGMPAGPAR SPAQPLDAQA RERLAQALSV YRDAARGH
|
|---|
| |