| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6290 |
|---|
| Symbol | |
|---|
| ID | 4454023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 471237 |
|---|
| End bp | 472199 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639698355 |
|---|
| Product | ribokinase |
|---|
| Protein accession | YP_839915 |
|---|
| Protein GI | 116686668 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | [TIGR02152] ribokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.631078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTGCGG CGCCCCATAC CAAGGAAGAG ACGCAGATGG AGACAATCGC CGTCATCGGC
AGCAACATGG TCGACCTCGT GACCTATGTC GCGCGCATGC CCGCCCGGGG CGAGACGCTG
GAGGCCCCGA ACTTCGAGCT CGGCTGCGGC GGCAAGGGCG CGAACCAGGC CGTCGCGGCC
GCGCGCCTCG GCGCGCGCGT CGTGATGGTC ACGAAGGTCG GCGACGACGT GTTCGCCGAC
AACACGATCC GCAACTTCGA ACGCGAAGGC ATCGACACCA CGCACGTGCG CAAGGTCGCC
GGCGTGCCGA GCGGCGTCGC GCCGATCTTC GTCGAGCCCG ATTCGAGCAA CAGCATCCTG
ATCGTCAAGG GCGCGAACCG CCACCTGCAG CCGGCCGACA TCGACGCGGC CGCGCCGATG
CTCGCCGAAT GCGCGCTGAT CGTGCTGCAG CTCGAGATCG AACTCGACAC CGTCTATCAC
GCGATCGAAT TCGGCGCACG GCACGGCATT CCGGTGCTGC TGAATCCCGC GCCGGCGGTC
GCCGACCTCG ATTTCGAACG CATCCGTTCC GTCGAATTCT TCGTGCCGAA CGAAACCGAG
CTCGCGATCG TGTCGGGCCT GCCGGTCGAT TCGCGCGAGA GCGCGACCCG CGCCGCCGAA
GCGCTGGTCG CACGCGGGCT CAAGCACGTG CTCGTCACGC TCGGCAGCAA CGGTTCGCTG
CTGGTGTCGC GCGACGGCGT GCATCACGTG CCGGGCGTCC CGGTCGACGC GCGCGACACG
ACGGGCGCCG GCGACGCGTA CATCGGCTGC TTCGCGCGCT GCTATGCCGC GTCGCGCGAC
GCGGTCGATG CGATGCGCTA CGCGTCCGCG TACGCCGCGC ATTCGGTCAC GGGCCTCGGC
ACGCAGAAAT CGTACGCCGA CGCCGCGACG TTCGAACGCT TCCTCCGCGA CGCCGGCTTC
TGA
|
|---|
| Protein sequence | MRAAPHTKEE TQMETIAVIG SNMVDLVTYV ARMPARGETL EAPNFELGCG GKGANQAVAA
ARLGARVVMV TKVGDDVFAD NTIRNFEREG IDTTHVRKVA GVPSGVAPIF VEPDSSNSIL
IVKGANRHLQ PADIDAAAPM LAECALIVLQ LEIELDTVYH AIEFGARHGI PVLLNPAPAV
ADLDFERIRS VEFFVPNETE LAIVSGLPVD SRESATRAAE ALVARGLKHV LVTLGSNGSL
LVSRDGVHHV PGVPVDARDT TGAGDAYIGC FARCYAASRD AVDAMRYASA YAAHSVTGLG
TQKSYADAAT FERFLRDAGF
|
|---|
| |