Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6289 |
Symbol | |
ID | 4454022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 469823 |
End bp | 471196 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639698354 |
Product | L-fucose transporter |
Protein accession | YP_839914 |
Protein GI | 116686667 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.642767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAA CCCGGATCGA ACACGCCCCC GACGGCTATT ACCTGAATCG CACGCCCCTC TTCGCGTTCA CGCTGCTGTG CTGCCTGTTC GCGCTGTGGG GCACCGCCGC GAACCTGAAC GACGTGCTGA TCGCGCAGTT CAAGAAATCG TTCTTCCTGT CCGATTTCGA ATCGGCGTTC GTGCAGTCCG CGTTCTATCT CGGCTACTTC TTCCTCGCGA TTCCGGCCGC GACCGTCGTG AAGAAGTTCA GCTACAAGAC GACGATCCTC GTCGGCCTGC TGCTCTACAC GACCGGCTGC CTGCTGTTCT TCCCGGCCGC GTCGATGGCG AAGTACGGGA TGTTCCTCGT CGCGCTGTTC GTGATCGCCG CGGGCCTGTC GTTCCTCGAA ACGGCGTCGA ACTCGTATTC GACGCTGATG GGCCCGCGCG ACACCAGCAC GCGGCGGCTG AACATCTCGC AGACGTTCTA TCCGTTCGGC GCGATGGCCG GCGTCTACAT GGGCAGCTTC CTGATCTTCA AGGAAGGCGA CGCGTCGCAT GCACAGCTCG CGGCGATGTC GGCCGCCGAC GCGCACACGC ACCAGCTCGC GATGATCCAG GCCACGCTTG AGCCGTACAA GTGGCTGATC GTCGTGCTCG TCGCCGTGTT CATCGTGTTC GCGCTTACGC CCTATCCGGC GTGCAAGGGC AATGCGGCGA GTACGGTCAT GCACCGGATC GACGCGCGCG GCACGCTCGC GCGCCTGTTC GGCAACCGGC GCTTCGTCGC GGGCGTGATC GCGCAATTCC TGTATGTCGG CGCGCAGGTC GGCGTGTGGA GTTTCACGAT CCGGCTCGCG ATGCAGATCG GCGGCCTCAC CGAACGCGGC GCGTCGCGCT ACCTGCTCGC GACCTTCTTC GCGTTCTTCG TCGGCAAGCT GATCGCGACG CTCGTGATGA AGCGCGTCGG CCCGGCCAAG GTGCTGATCG TCTACGGCAT CCTGTGCATC GCACTGCTCG CGTACACGAT CAGCGTGCAC AACATCACCG CCGTGTATGC GGCCGTGTGC GTGAGCATCT TCCTCGGCCC GTGCTGGCCG ACGATCTACG GGCTGACGAT CGACGGCCTC GGCAAGGACA CCGAATACGG CGGCTCGATC CTCGTGATGA GCATCGTCGG CGGCGCGGTC GTGCCGCTGA TCCAGGGGCT GATCTCCGAT CACACCGGCG GCAACATGCA GCTCGCGTTC GTCGTGCCGC TGCTGTGCTT CGTCGTGATC GTGTACTACG GCTTCTACTG CCTGCGTCAC CTGCCGGCGG CGACGCCCGA CGCGGCGGCC GACGGCCATG CGTCCACGCG CTACGCCGCG ACGCGCAACA CGTCGGGAGC CTGA
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Protein sequence | MSRTRIEHAP DGYYLNRTPL FAFTLLCCLF ALWGTAANLN DVLIAQFKKS FFLSDFESAF VQSAFYLGYF FLAIPAATVV KKFSYKTTIL VGLLLYTTGC LLFFPAASMA KYGMFLVALF VIAAGLSFLE TASNSYSTLM GPRDTSTRRL NISQTFYPFG AMAGVYMGSF LIFKEGDASH AQLAAMSAAD AHTHQLAMIQ ATLEPYKWLI VVLVAVFIVF ALTPYPACKG NAASTVMHRI DARGTLARLF GNRRFVAGVI AQFLYVGAQV GVWSFTIRLA MQIGGLTERG ASRYLLATFF AFFVGKLIAT LVMKRVGPAK VLIVYGILCI ALLAYTISVH NITAVYAAVC VSIFLGPCWP TIYGLTIDGL GKDTEYGGSI LVMSIVGGAV VPLIQGLISD HTGGNMQLAF VVPLLCFVVI VYYGFYCLRH LPAATPDAAA DGHASTRYAA TRNTSGA
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