Gene Bcen2424_6281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6281 
Symbol 
ID4454014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp462208 
End bp463008 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID639698346 
ProductAraC family transcriptional regulator 
Protein accessionYP_839906 
Protein GI116686659 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0183081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.898598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGAC TTGTCGCCAA TCGGACACGC GAGTCCACCC CGCCGTTTGC GCACCTTCGC 
TACGAATCGA CGCCGATGCC CGTGTCGGCG ATGGCGGCCA CGTACGTGCA CGGCACGTCG
ATCGCGCCGC ACCGCCATCG ACGCGCGCAA TTGCTCTACG CGATCGAGGG CGTGATGCAC
GTGGAATCGG AAGGCGCGTC GTGGATCGTG CCGCCGACGC GCGGCGTGTG GCTCGAAGCC
GGCCTCGACC ATACGGTGCA GATGAGCGGC GACGTGCAGA TGCGTACCGT GTTCGTCGAA
CCGGGCGCGG TCGAGCACCT GCCCTCGCGC AGTTGCGTCG TCGAAGTGCA TCCGCTGCTG
CGCGAGCTGA TTCTCGCCGC GGTCGACGTG CCGCTCGATT ACGCGCCGGG CTCGCGCCAC
GATCACCTGA TGCGCCTGCT GCTTGCCGAA GTGACCGTCG CGCCGCTGTT GCCGCTGTAC
CTGCCGTGGC CGCACGATGC GCGCCTGCGG ACGATCTGCG ACACGCTGGT CGCCACGCCC
GACGACCTGC GCACGATCGC CGAGTGGGCC GACCTGCTCG GCCTGTCGGT GCGCACGCTG
CATCGCGCGT TCCGCCGCGA GACGGGGCTC AGCTTCCGCC GCTGGCGCGA GCAGGCGCGG
CTGCTGCTCG CGCTCAAGCG TCTGGCGCAC GGCGAGAAAG TGCTGACCGT CGCGATGGAT
CACGGCTACA GCAGCCAGAG CGCGTTCTCC GCGATGTTCA AGCGGCACTT CGGGATGTCG
CCGTCGGCGT TTTACGCGTA A
 
Protein sequence
MSRLVANRTR ESTPPFAHLR YESTPMPVSA MAATYVHGTS IAPHRHRRAQ LLYAIEGVMH 
VESEGASWIV PPTRGVWLEA GLDHTVQMSG DVQMRTVFVE PGAVEHLPSR SCVVEVHPLL
RELILAAVDV PLDYAPGSRH DHLMRLLLAE VTVAPLLPLY LPWPHDARLR TICDTLVATP
DDLRTIAEWA DLLGLSVRTL HRAFRRETGL SFRRWREQAR LLLALKRLAH GEKVLTVAMD
HGYSSQSAFS AMFKRHFGMS PSAFYA