Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6281 |
Symbol | |
ID | 4454014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 462208 |
End bp | 463008 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639698346 |
Product | AraC family transcriptional regulator |
Protein accession | YP_839906 |
Protein GI | 116686659 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0183081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.898598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACGAC TTGTCGCCAA TCGGACACGC GAGTCCACCC CGCCGTTTGC GCACCTTCGC TACGAATCGA CGCCGATGCC CGTGTCGGCG ATGGCGGCCA CGTACGTGCA CGGCACGTCG ATCGCGCCGC ACCGCCATCG ACGCGCGCAA TTGCTCTACG CGATCGAGGG CGTGATGCAC GTGGAATCGG AAGGCGCGTC GTGGATCGTG CCGCCGACGC GCGGCGTGTG GCTCGAAGCC GGCCTCGACC ATACGGTGCA GATGAGCGGC GACGTGCAGA TGCGTACCGT GTTCGTCGAA CCGGGCGCGG TCGAGCACCT GCCCTCGCGC AGTTGCGTCG TCGAAGTGCA TCCGCTGCTG CGCGAGCTGA TTCTCGCCGC GGTCGACGTG CCGCTCGATT ACGCGCCGGG CTCGCGCCAC GATCACCTGA TGCGCCTGCT GCTTGCCGAA GTGACCGTCG CGCCGCTGTT GCCGCTGTAC CTGCCGTGGC CGCACGATGC GCGCCTGCGG ACGATCTGCG ACACGCTGGT CGCCACGCCC GACGACCTGC GCACGATCGC CGAGTGGGCC GACCTGCTCG GCCTGTCGGT GCGCACGCTG CATCGCGCGT TCCGCCGCGA GACGGGGCTC AGCTTCCGCC GCTGGCGCGA GCAGGCGCGG CTGCTGCTCG CGCTCAAGCG TCTGGCGCAC GGCGAGAAAG TGCTGACCGT CGCGATGGAT CACGGCTACA GCAGCCAGAG CGCGTTCTCC GCGATGTTCA AGCGGCACTT CGGGATGTCG CCGTCGGCGT TTTACGCGTA A
|
Protein sequence | MSRLVANRTR ESTPPFAHLR YESTPMPVSA MAATYVHGTS IAPHRHRRAQ LLYAIEGVMH VESEGASWIV PPTRGVWLEA GLDHTVQMSG DVQMRTVFVE PGAVEHLPSR SCVVEVHPLL RELILAAVDV PLDYAPGSRH DHLMRLLLAE VTVAPLLPLY LPWPHDARLR TICDTLVATP DDLRTIAEWA DLLGLSVRTL HRAFRRETGL SFRRWREQAR LLLALKRLAH GEKVLTVAMD HGYSSQSAFS AMFKRHFGMS PSAFYA
|
| |