Gene Bcen2424_6277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6277 
Symbol 
ID4454010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp459228 
End bp460082 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID639698342 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_839902 
Protein GI116686655 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.286328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCG AAACCGTCGG CGTCGTGGGC GCCGGAACCA TGGGTAACGG CATTGCGCAA 
ACCGCCGCCG TTGCAGGACT GAACGTCGTG ATGATCGACG TCAGCGACGC CGCGCTCGAC
AAGGGCCTCG CGACGCTCAA GGGTAGCCTC GAGCGGCTCG TGTCGAAGGA CAAGCTCGCG
GCCGACGCCC GCGATGCGGC GCTCGCGCGC ATCACGACGT CGACCGACTA CGCGAAGCTC
GCCGCCGTCG ACATCGTGAT CGAAGCCGCG ACCGAGAACG TCGAGCTGAA GGGGCGCATC
CTGAAGCAGA TCGAGGCCGT CGCGCGTCCG GACGCGATCA TCGCGACCAA CACGTCGTCG
ATCTCGATCA CCGCGCTCGC GGCGCCGCTC GCCGATCCGT CGCGTTTTCT CGGCATGCAC
TTCTTCAACC CGGTGCCGCT GATGCCGCTC GTCGAGATCA TCCGCGGGCT GCAGACGAGC
GACGCGACCG CGTCGGCCGT GCGCGCGCTG ACCGAGCGTT TCGACAAGTC GCCGATCGGC
GTGCGCAACT CGCCGGGCTT CGTCGTGAAC CGGATCCTGG TGCCGATGAT CAACGAAGCG
TTCTTCGTGC TGGCCGAAGG CATCGCGTCG GCCGAGGAGA TCGACGCGGG GATGAAGCTC
GGCGCGAACC ACCCGATCGG GCCGCTCGCG CTGGCCGACC TCGTTGGCCT CGACGTGTGC
CTCGCGGTGA TGGACGTGTT CGTGAAGGAC TTCGGCGATC CGAAGTATCG TGCGTGCCCG
CTGCTGCGCG AGATGGTGTC GGCCGGGCGG CTCGGGCGCA AGACCGGGCG TGGGGTGTAC
GACTACAGCA AGTAA
 
Protein sequence
MAIETVGVVG AGTMGNGIAQ TAAVAGLNVV MIDVSDAALD KGLATLKGSL ERLVSKDKLA 
ADARDAALAR ITTSTDYAKL AAVDIVIEAA TENVELKGRI LKQIEAVARP DAIIATNTSS
ISITALAAPL ADPSRFLGMH FFNPVPLMPL VEIIRGLQTS DATASAVRAL TERFDKSPIG
VRNSPGFVVN RILVPMINEA FFVLAEGIAS AEEIDAGMKL GANHPIGPLA LADLVGLDVC
LAVMDVFVKD FGDPKYRACP LLREMVSAGR LGRKTGRGVY DYSK