Gene Bcen2424_6276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6276 
Symbol 
ID4454079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp457996 
End bp459189 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content68% 
IMG OID639698341 
Productbeta-ketothiolase 
Protein accessionYP_839901 
Protein GI116686654 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.115814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG CAGCGAAGGA AGTCGTGGTG GTGAGCGGGG TCCGTACCGC GATCGGTGAT 
TTCGGCGGCA GCCTGAAGGA TTTCTCGCCG ACCGACCTCG GCGCGAAGGT GGTCGCCGAA
GTGCTGTCGC GCGCGAACGT GCCGGGCGAC GCGGTCGGGC ACGTCGTGTT CGGCCACGTC
GTGAACACCG AGCCGAAGGA CATGTATCTC GCGCGTGTCG CGGCGATCAA CGGCGGCGTC
GCGCAGCACA CGCCGGCGCT GACCGTGAAC CGCCTGTGCG GCTCGGGCCT GCAGGCGATC
GTATCGGCCG CGCAGACGAT CATGCTCGGC GATGCCGACG TCGCGATCGG CGGCGGCTCG
GAGAGCATGA GCCGCGCGCC GTACACCGTG CCGGCCGCGC GCTTCGGCCA GCGCATGGGC
GACGGCAAGC TCGTCGACAT GATGCTCGGC GCGCTGCACG ACCCGTTCCA GACGATCCAC
ATGGGCGTGA CCGCCGAGAA CGTCGCGAAG AAATACGACA TCTCGCGTGA CGCGCAGGAT
GCGCTGGCGC TCGAATCGCA TCGTCGCGCG GCGCGCGCGA TCGCGGAAGG GCGTTTCAAG
GACCAGATCC TGCCGATCTC GATCCGCACG AAGAAGGGCG AAGTGGCGTT CGATACCGAC
GAGCACGTGC GCCACGACGC GAGCGCGGAC GATTTCACGA AGCTCAAGCC GGTGTTCGCG
AAGGAGAACG GCACCGTGAC GGCCGGCAAC GCGTCGGGCA TCAACGACGC GGCCGCCGCC
GTGCTGATGA TGAGCGCGGA CGCCGCACGC GCGCAGGGCG TGAAGCCGCT CGCCCGCCTC
GTCGCGTATG CGCACGCAGG CGTCGATCCG GCGTACATGG GCATCGGCCC GGTGCCGGCC
ACGCAGAAGG CGCTCGAACG CGCGGGCCTG AAGATCAGCG ATCTCGACGT GATCGAAGCC
AACGAGGCAT TCGCGGCCCA GGCGTGTGCG GTCACGCAGG AGCTCGGCCT CGATCCGGCC
AAGGTCAACC CGAACGGCTC GGGCATCTCG CTCGGTCACC CGATCGGTGC GACCGGCGCG
CTGATCACGG TGAAGGCGCT GTACGAGCTG AAGCGCATCG GCGGGCGTTA CGCGCTCGTG
ACGATGTGCA TCGGCGGCGG CCAGGGGATT GCGGCGATCT TCGAGAACAT CTGA
 
Protein sequence
MSNAAKEVVV VSGVRTAIGD FGGSLKDFSP TDLGAKVVAE VLSRANVPGD AVGHVVFGHV 
VNTEPKDMYL ARVAAINGGV AQHTPALTVN RLCGSGLQAI VSAAQTIMLG DADVAIGGGS
ESMSRAPYTV PAARFGQRMG DGKLVDMMLG ALHDPFQTIH MGVTAENVAK KYDISRDAQD
ALALESHRRA ARAIAEGRFK DQILPISIRT KKGEVAFDTD EHVRHDASAD DFTKLKPVFA
KENGTVTAGN ASGINDAAAA VLMMSADAAR AQGVKPLARL VAYAHAGVDP AYMGIGPVPA
TQKALERAGL KISDLDVIEA NEAFAAQACA VTQELGLDPA KVNPNGSGIS LGHPIGATGA
LITVKALYEL KRIGGRYALV TMCIGGGQGI AAIFENI