| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6275 |
|---|
| Symbol | |
|---|
| ID | 4454078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 456275 |
|---|
| End bp | 457948 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639698340 |
|---|
| Product | electron-transferring-flavoprotein dehydrogenase |
|---|
| Protein accession | YP_839900 |
|---|
| Protein GI | 116686653 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0634592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.733827 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCACAC AGGACTTGCT CGCGCAATAC GGCCCGCGCG AATCGATGGA ATACGACGTC
GTGATCGTCG GCGGCGGCCC CGCCGGGCTG TCGGCGGCGA TCCGGCTCAA GCAGCTGGCC
GCCGAGAAAG GCACCGAGAT CGGCGTGTGC GTGCTCGAGA AGGGTTCCGA GATCGGCGCG
CACATCCTGT CGGGCGCGGT GATGGACCCG CGCGCGATCA CCGAGCTGTT TCCCGACTGG
AAGGAACGCG GCGCGCCGCT CGACGTCGAG GTGACGGAAG ACCGCTTCCT GTTTCTGTCC
GAGAAGAGCG CGGTGACCAC GCCGAACTGG GCGCTGCCGG ACAACTTCAA GAACCACGGC
AATTACGTGA TCTCGCTGGG CAACGTCACG CGCTGGCTTG GAGCACAGGC CGAGGCGCTG
GGCGTCGAGA TCTTCCCCGG CTTCCCCGCT GCCGAGATTC TCTACAACGA CGACGGCTCG
GTCAAAGGCG TCGCCACCGG CAACATGGGC GTGGGCAAGG ACGGCGAGCC GACCGAGAAC
TTCCAGCTCG GCATGGAGCT GCACGCGAAG TACACGCTGT TCGCCGAAGG CTGCCGCGGC
CATCTGGGCC GCCAACTGAT CTCGAAGTTC AAGCTCGACG CGAACGCCGA TCCGCAGGCG
TACGGGATCG GCATCAAGGA ACTGTGGGAA ATCGACCCGG CCAAGCACAA GCCGGGCCTC
GTGATCCACA CGGCGGGCTG GCCGCTGAAG TCCGACACGT ACGGCGGCTC GTTCCTGTAT
CACATGGACA ACAACCAGGT GGTGGTCGGC TTCGTGGTGG GCCTGGGCTA CACGAACCCG
TACCTGTCGC CGTTCGAGGA ATTCCAGCGC TACAAGACGC ATCCGTCGAT CCGCGCGTTC
CTCGAAGGCG GCAAGCGCGT GTCGTACGGC GCACGCGCGA TCACGGCGGG CGGCCTGCTG
TCGCTGCCGA AGACGGTGTT CCCGGGCGGC GCGCTGATCG GCGACGACGC GGGCTTCCTG
AACGCGTCGC GGATCAAGGG CAGCCACGCG GCGATCAAGA CCGGCATGCT GGCCGCCGAT
GCCGCATTCG ACGCGGTGCA GGCCGGCCGC CAGTCGGACG AGCTCAATGC GTACCCGGAC
GCGTTCAAGC AATCGTGGCT GTACACGGAG CTGTACCGCG CGCGCAACTT CAAGCAGTGG
ATGGCCAAGG GCCTGTACCT GGGTACGCTG ATGGTGGGGC TCGAGCAGAA GGTGATGGGC
GGCAACGTGC CGTGGACGCT GCATCACCAG CACGCGGACC ACGAGATGCT GAAGCCGGCG
GCGCAGTGCG AGCCGATCGC GTATCCGAAG CCGGACGGCA AGCTGACGTT CGACCGGCTG
TCGTCGGTAT TCATCTCGAA CACGAACCAC GAGGAGAACC AGCCGGCGCA CCTGACGCTG
AAGGACGCGA GCGTGCCGGT GAACGTGAAC CTGCGCACGT ACGCGGGGCC GGAGGCGCGC
TTCTGCCCGG CGGCGGTGTA CGAGTTCGTG AAGAACGACG ACGGCGGCGA GCGCCTCGTG
ATCAACGCGC AGAACTGCGT GCACTGCAAG ACCTGCGACA TCAAGGACCC GACGCAGAAC
ATCGTGTGGG TCACGCCCGA AGGCGGCGGC GGGCCGAATT ACCCGAACAT GTAA
|
|---|
| Protein sequence | MTTQDLLAQY GPRESMEYDV VIVGGGPAGL SAAIRLKQLA AEKGTEIGVC VLEKGSEIGA
HILSGAVMDP RAITELFPDW KERGAPLDVE VTEDRFLFLS EKSAVTTPNW ALPDNFKNHG
NYVISLGNVT RWLGAQAEAL GVEIFPGFPA AEILYNDDGS VKGVATGNMG VGKDGEPTEN
FQLGMELHAK YTLFAEGCRG HLGRQLISKF KLDANADPQA YGIGIKELWE IDPAKHKPGL
VIHTAGWPLK SDTYGGSFLY HMDNNQVVVG FVVGLGYTNP YLSPFEEFQR YKTHPSIRAF
LEGGKRVSYG ARAITAGGLL SLPKTVFPGG ALIGDDAGFL NASRIKGSHA AIKTGMLAAD
AAFDAVQAGR QSDELNAYPD AFKQSWLYTE LYRARNFKQW MAKGLYLGTL MVGLEQKVMG
GNVPWTLHHQ HADHEMLKPA AQCEPIAYPK PDGKLTFDRL SSVFISNTNH EENQPAHLTL
KDASVPVNVN LRTYAGPEAR FCPAAVYEFV KNDDGGERLV INAQNCVHCK TCDIKDPTQN
IVWVTPEGGG GPNYPNM
|
|---|
| |