Gene Bcen2424_6273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6273 
Symbol 
ID4454076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp452998 
End bp454044 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content68% 
IMG OID639698338 
ProductAraC family transcriptional regulator 
Protein accessionYP_839898 
Protein GI116686651 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.294899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.494705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCT CAGATTCACT ATCCGCCCGG CCCGGGCGTG CGCTGCCTTC GCCGAGCGCG 
ACGGTGCCGA TCTCGCTCGT CAACGGCTTT CTCGCGAGCG CGGGCGTGCA GCGCGACGTG
GTCGAGCGCT ACCTGCGCGG CGCCGGCATT CCGATCGAGC TGCTCGGCGA GCCGCATGCG
CGCGTGACGG AGGAGCAGTT CTCGACGCTG TACCGCACGC TCGCGATCGA CCTCGACGAC
GAGATGCCCG GCATCTTCTC GCGCCCGCTG CGCGGCGGCA CGCTGAAGTA CCTGTGCCTG
AGCCTGCTCG ATGCGCGCAA CCTCGAAACG GCGCTGCACC GTTTCGGGCA ATTCTTCCAT
ATCCTGCTCG ACGACTTCTT CGTCGAATCG AAGCGCGACG ATCTCGTCGC GCAGGTGCTG
CTGCGCCCGA ACGACGCCAT TGGGCCGATC GGCGCGCTCG GCCAGGAGCT GATGCTCAAG
CTCGTGCACG GCGTGTGCTC CTGGCTGATC GGCCAGAAGA TCCCGCTGCT GCAGATCGAG
TTCGCGTGCC CGCGGCCGCG CCATGCGGTC GATCACCTGT ACTTCTTCAC CGGCGCCGTG
CAGTTCGACT GCGCCCGCAC GCTGATGCGC TTCAGCGCCG ATTACCTCGA CGCGCCGATC
CGGCAGAGCA AGCGCAACCT GAGCAAGTTT CTCGCGCGTG CGCCCGGCGA CTGGATCTTC
GAATCGTTCA GCGAACAGCT CGTGTGCCAC CGCGTGCGGC AGTACCTGTC GGCCGCGCTG
CCGGATCTGC CCGTGATCGA CCAGGCGGCC GAGCACCTGC ATTGTTCGGT GCGCACGCTG
AGCCGTCACC TGGCCGCCGA AGGGACGACG TTCCAGGTGC TGAAGGACGA GCTGCGGCGC
GATATCGCGA TCCAGCGGCT GACCGATACG CCGGACACGA TCGCGGCGAT CGGCGCCGAT
ATCGGCTTCG ACGATCCGAG CGCGTTTCAT CGCGCGTTCC GGCACTGGAC GGGGAGTACG
CCAGGGACGT ACCGGCGTCG GGCGTGA
 
Protein sequence
MTGSDSLSAR PGRALPSPSA TVPISLVNGF LASAGVQRDV VERYLRGAGI PIELLGEPHA 
RVTEEQFSTL YRTLAIDLDD EMPGIFSRPL RGGTLKYLCL SLLDARNLET ALHRFGQFFH
ILLDDFFVES KRDDLVAQVL LRPNDAIGPI GALGQELMLK LVHGVCSWLI GQKIPLLQIE
FACPRPRHAV DHLYFFTGAV QFDCARTLMR FSADYLDAPI RQSKRNLSKF LARAPGDWIF
ESFSEQLVCH RVRQYLSAAL PDLPVIDQAA EHLHCSVRTL SRHLAAEGTT FQVLKDELRR
DIAIQRLTDT PDTIAAIGAD IGFDDPSAFH RAFRHWTGST PGTYRRRA