| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6242 |
|---|
| Symbol | |
|---|
| ID | 4454353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 419931 |
|---|
| End bp | 421046 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639698307 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_839867 |
|---|
| Protein GI | 116686620 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.718979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.984052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAG TGCCTTTGCC TGACAGCAAC ACCCTCGAAG AACCGTCCAC CGGCGCGGTC
GTGCGCGACC TGCGCCGCGT GCCCATTCAT CCGGATCACT GGTATCCGCT CGCGTGGTCG
CGCGAGCTCA AGCGCGGCAA GACGCTCGGC GTGCGCTTCG CCGGCGATCC GATCGTGCTC
GTGCGCACCG AATCGGGCGC CGTGTATGCG CTCGAAGATC GTTGCGCGCA CCGCCAGGTG
CCACTGCACG CGGGCGTCGT GAGCGGCGAA ACGCTGCGCT GCTGCTATCA CGGCTGGACC
TACGCGTGCG ACAGCGGCCG TTGCGTCGAC GTGCCCTACC TCGGCCGCGA GCGCTTGCCC
AACGGCGTGC GCGCGTATCC GTGCCGCGAG GCGCACGGGC TGATCTTCGT GTTTCCAGGC
GACGCCACGC TCGCCGAAAC ACGGCCGTTC CCCGCGCTCG AATCGGCGGA CAACCCCGCG
TACAAGACGC GCCGCTTCGG TCGCGAGGTC AAGTGCCACT ATTCGTTCAT GCACGAGAAC
CTGATGGACA TGAACCATCA GTTCCTGCAT CGCAAGCAGA TGGGGCAGAT GCGCGCTCGC
TCGGTGGGCC GCCGCCGCGG CGACGACTGG GTCGAGGTCG ACTACACGTT CGCGCGGATG
GAAGGCAAGC AGCCGGTCGG CGAGGCGCTC GTGTTCGGCG CGAGCAAGAA GCCGGCCGAC
CAGTCCGACA AGAGCGTGAT GACGGTGCGC ACCGGCTACC CGTACCAGAC GCTGCAGATT
CGCTCGAGCG AAGGCACGCT CGTGATGGAC CTGTGGATCG TCTACGTGCC GCTCGATGCC
GAGCAGCGCA CCAACCGCAC GTTCGGGCTG CTGTCGATCC ACAAGCCCGG CATCCCGTTC
GCACTCGATC TCGCATGGCC GCTGCTCGTG TGGTTCACCG AGCGGATCTT CCGCGAGGAT
CGCTGGATCG TCGAACGCGA ACAGGAAGCG CACGACGCCC AAGGCGCCGA CTGGAACCAC
GAGGTGTTTC CGGTCATCAA CGAGCTGCGC GACCTGCTGC GCCAGTGCGG CGCGCGCACC
GTGATCCCGA TTCGCGACGT GCGCGACAGC GCGTAA
|
|---|
| Protein sequence | MRAVPLPDSN TLEEPSTGAV VRDLRRVPIH PDHWYPLAWS RELKRGKTLG VRFAGDPIVL
VRTESGAVYA LEDRCAHRQV PLHAGVVSGE TLRCCYHGWT YACDSGRCVD VPYLGRERLP
NGVRAYPCRE AHGLIFVFPG DATLAETRPF PALESADNPA YKTRRFGREV KCHYSFMHEN
LMDMNHQFLH RKQMGQMRAR SVGRRRGDDW VEVDYTFARM EGKQPVGEAL VFGASKKPAD
QSDKSVMTVR TGYPYQTLQI RSSEGTLVMD LWIVYVPLDA EQRTNRTFGL LSIHKPGIPF
ALDLAWPLLV WFTERIFRED RWIVEREQEA HDAQGADWNH EVFPVINELR DLLRQCGART
VIPIRDVRDS A
|
|---|
| |